Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SRFBP1Q8NEF9 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.9□□□□□ -0.19
SRFBP1Q8NEF9 TCAM1P-207ENST00000485295 1537 ntBASIC13.9□□□□□ -0.19
SRFBP1Q8NEF9 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SRFBP1Q8NEF9 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SRFBP1Q8NEF9 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 AC244394.1-201ENST00000435000 1665 ntBASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 AC020910.6-201ENST00000623084 1459 ntBASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 AL161932.2-201ENST00000435436 679 ntBASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 MIR4259-201ENST00000584466 101 ntBASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 AL162426.1-201ENST00000624141 743 ntBASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 TUBB1P2-201ENST00000422712 1306 ntBASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 TUBB1P1-201ENST00000503144 1300 ntBASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SRFBP1Q8NEF9 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 AC107918.4-201ENST00000641966 3141 ntBASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 AL645933.1-201ENST00000440087 609 ntBASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 HSPB1P2-201ENST00000448722 546 ntBASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.88□□□□□ -0.19
SRFBP1Q8NEF9 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms