Protein–RNA interactions for Protein: Q8NB49

ATP11C, Phospholipid-transporting ATPase IG, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11CQ8NB49 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ATP11CQ8NB49 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATP11CQ8NB49 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.22■□□□□ 0.03
ATP11CQ8NB49 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ATP11CQ8NB49 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP11CQ8NB49 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.22■□□□□ 0.03
ATP11CQ8NB49 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.22■□□□□ 0.03
ATP11CQ8NB49 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATP11CQ8NB49 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.22■□□□□ 0.03
ATP11CQ8NB49 CICP20-201ENST00000443330 2801 ntBASIC15.21■□□□□ 0.03
ATP11CQ8NB49 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 AL138725.1-201ENST00000407347 1314 ntBASIC15.21■□□□□ 0.03
ATP11CQ8NB49 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 RPSAP36-202ENST00000494591 1261 ntBASIC15.21■□□□□ 0.03
ATP11CQ8NB49 AC108725.1-201ENST00000495472 409 ntBASIC15.21■□□□□ 0.03
ATP11CQ8NB49 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ATP11CQ8NB49 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ATP11CQ8NB49 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
ATP11CQ8NB49 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ATP11CQ8NB49 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ATP11CQ8NB49 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 AC003102.2-201ENST00000589195 1469 ntBASIC15.2■□□□□ 0.02
ATP11CQ8NB49 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 AC009093.2-202ENST00000620513 2079 ntBASIC15.2■□□□□ 0.02
ATP11CQ8NB49 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 RN7SKP230-201ENST00000365642 335 ntBASIC15.2■□□□□ 0.02
ATP11CQ8NB49 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.2■□□□□ 0.02
ATP11CQ8NB49 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 TLE1P1-201ENST00000422965 589 ntBASIC15.2■□□□□ 0.02
ATP11CQ8NB49 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 CHMP1AP1-201ENST00000445563 662 ntBASIC15.2■□□□□ 0.02
ATP11CQ8NB49 HIST2H2BB-201ENST00000449108 381 ntBASIC15.2■□□□□ 0.02
ATP11CQ8NB49 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 AC002472.3-201ENST00000640124 621 ntBASIC15.2■□□□□ 0.02
ATP11CQ8NB49 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP11CQ8NB49 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms