Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CTR9Q6PD62 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CTR9Q6PD62 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 RN7SL832P-201ENST00000607781 1756 ntBASIC17.2■□□□□ 0.34
CTR9Q6PD62 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 AP002353.1-201ENST00000528257 1599 ntBASIC17.2■□□□□ 0.34
CTR9Q6PD62 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.2■□□□□ 0.34
CTR9Q6PD62 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 RN7SL769P-201ENST00000469386 295 ntBASIC17.2■□□□□ 0.34
CTR9Q6PD62 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 RHOQP1-201ENST00000555758 579 ntBASIC17.2■□□□□ 0.34
CTR9Q6PD62 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 FGFR3P5-201ENST00000564496 886 ntBASIC17.2■□□□□ 0.34
CTR9Q6PD62 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 AC106872.11-201ENST00000605838 421 ntBASIC17.2■□□□□ 0.34
CTR9Q6PD62 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CTR9Q6PD62 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTR9Q6PD62 MYO15B-237ENST00000642007 4893 ntBASIC17.19■□□□□ 0.34
CTR9Q6PD62 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTR9Q6PD62 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTR9Q6PD62 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTR9Q6PD62 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTR9Q6PD62 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTR9Q6PD62 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTR9Q6PD62 AC104506.1-201ENST00000609247 429 ntBASIC17.19■□□□□ 0.34
CTR9Q6PD62 AL353770.1-201ENST00000614915 403 ntBASIC17.19■□□□□ 0.34
CTR9Q6PD62 AC079336.7-201ENST00000623428 1078 ntBASIC17.19■□□□□ 0.34
CTR9Q6PD62 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTR9Q6PD62 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 AC015909.3-201ENST00000572855 1794 ntBASIC17.19■□□□□ 0.34
CTR9Q6PD62 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTR9Q6PD62 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTR9Q6PD62 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTR9Q6PD62 AC015802.1-201ENST00000588104 1449 ntBASIC17.19■□□□□ 0.34
CTR9Q6PD62 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTR9Q6PD62 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 AC232323.1-201ENST00000540724 2099 ntBASIC17.19■□□□□ 0.34
CTR9Q6PD62 AC064801.2-201ENST00000625052 1303 ntBASIC17.19■□□□□ 0.34
CTR9Q6PD62 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.19■□□□□ 0.34
CTR9Q6PD62 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CTR9Q6PD62 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTR9Q6PD62 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms