Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 KRT8P13-201ENST00000463294 1010 ntBASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 SERPINA13P-202ENST00000478994 924 ntBASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 AC120057.1-201ENST00000483947 663 ntBASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 AC106794.1-201ENST00000506935 792 ntBASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 AC103988.2-201ENST00000561804 725 ntBASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 MIR4783-201ENST00000580343 82 ntBASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 AC005324.6-201ENST00000587972 613 ntBASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 BNIP3P13-201ENST00000599968 566 ntBASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 MIR6720-201ENST00000611664 98 ntBASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 AP000346.4-201ENST00000614827 381 ntBASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 MIR1247-201ENST00000408206 136 ntBASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 AC018735.1-201ENST00000437208 1502 ntBASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 AC244394.1-201ENST00000435000 1665 ntBASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 AL008718.2-201ENST00000609206 1313 ntBASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
TTC39BQ5VTQ0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC39BQ5VTQ0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms