Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 ABCD1P3-201ENST00000562927 605 ntBASIC13.8□□□□□ -0.2
RIF1Q5UIP0 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 AP005264.5-201ENST00000590066 467 ntBASIC13.8□□□□□ -0.2
RIF1Q5UIP0 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 SOD1-202ENST00000389995 865 ntTSL 3 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 AC009517.1-201ENST00000454750 570 ntBASIC13.8□□□□□ -0.2
RIF1Q5UIP0 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 OR52V1P-201ENST00000515557 898 ntBASIC13.8□□□□□ -0.2
RIF1Q5UIP0 PMM2-216ENST00000569958 698 ntTSL 2 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 RN7SL480P-201ENST00000581481 294 ntBASIC13.8□□□□□ -0.2
RIF1Q5UIP0 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 AC239600.1-201ENST00000603201 462 ntBASIC13.8□□□□□ -0.2
RIF1Q5UIP0 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 AL450346.2-201ENST00000495602 1024 ntBASIC13.79□□□□□ -0.2
RIF1Q5UIP0 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 MIR4265-201ENST00000582152 99 ntBASIC13.79□□□□□ -0.2
RIF1Q5UIP0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 AC100858.1-201ENST00000514059 1228 ntBASIC13.79□□□□□ -0.2
RIF1Q5UIP0 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 AL359219.1-201ENST00000556311 934 ntBASIC13.79□□□□□ -0.2
RIF1Q5UIP0 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RIF1Q5UIP0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.78□□□□□ -0.2
RIF1Q5UIP0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms