Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ACTA1P68133 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ACTA1P68133 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ACTA1P68133 SLC7A15P-201ENST00000424028 1363 ntBASIC12.99□□□□□ -0.33
ACTA1P68133 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ACTA1P68133 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ACTA1P68133 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.99□□□□□ -0.33
ACTA1P68133 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.99□□□□□ -0.33
ACTA1P68133 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.99□□□□□ -0.33
ACTA1P68133 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ACTA1P68133 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.99□□□□□ -0.33
ACTA1P68133 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.99□□□□□ -0.33
ACTA1P68133 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ACTA1P68133 AC092552.1-201ENST00000547243 906 ntBASIC12.99□□□□□ -0.33
ACTA1P68133 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ACTA1P68133 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.99□□□□□ -0.33
ACTA1P68133 AP001063.1-201ENST00000568332 529 ntBASIC12.99□□□□□ -0.33
ACTA1P68133 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.99□□□□□ -0.33
ACTA1P68133 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.99□□□□□ -0.33
ACTA1P68133 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.99□□□□□ -0.33
ACTA1P68133 AC005498.2-205ENST00000593218 784 ntBASIC12.99□□□□□ -0.33
ACTA1P68133 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.99□□□□□ -0.33
ACTA1P68133 AC005252.2-201ENST00000624630 1141 ntBASIC12.99□□□□□ -0.33
ACTA1P68133 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ACTA1P68133 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.99□□□□□ -0.33
ACTA1P68133 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ACTA1P68133 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ACTA1P68133 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.99□□□□□ -0.33
ACTA1P68133 AC068760.1-201ENST00000493579 1953 ntBASIC12.99□□□□□ -0.33
ACTA1P68133 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.99□□□□□ -0.33
ACTA1P68133 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ACTA1P68133 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.99□□□□□ -0.33
ACTA1P68133 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ACTA1P68133 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ACTA1P68133 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
ACTA1P68133 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ACTA1P68133 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ACTA1P68133 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ACTA1P68133 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ACTA1P68133 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.99□□□□□ -0.33
ACTA1P68133 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ACTA1P68133 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.99□□□□□ -0.33
ACTA1P68133 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.98□□□□□ -0.33
ACTA1P68133 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.98□□□□□ -0.33
ACTA1P68133 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.98□□□□□ -0.33
ACTA1P68133 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
ACTA1P68133 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.98□□□□□ -0.33
ACTA1P68133 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ACTA1P68133 AC009093.10-201ENST00000641956 1442 ntBASIC12.98□□□□□ -0.33
ACTA1P68133 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.98□□□□□ -0.33
ACTA1P68133 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ACTA1P68133 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ACTA1P68133 AL161932.2-201ENST00000435436 679 ntBASIC12.98□□□□□ -0.33
ACTA1P68133 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.98□□□□□ -0.33
ACTA1P68133 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.98□□□□□ -0.33
ACTA1P68133 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.98□□□□□ -0.33
ACTA1P68133 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.98□□□□□ -0.33
ACTA1P68133 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ACTA1P68133 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.98□□□□□ -0.33
ACTA1P68133 AC104506.1-201ENST00000609247 429 ntBASIC12.98□□□□□ -0.33
ACTA1P68133 MEX3B-202ENST00000558133 4333 ntBASIC12.98□□□□□ -0.33
ACTA1P68133 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ACTA1P68133 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ACTA1P68133 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.98□□□□□ -0.33
ACTA1P68133 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.98□□□□□ -0.33
ACTA1P68133 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.98□□□□□ -0.33
ACTA1P68133 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ACTA1P68133 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ACTA1P68133 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms