Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.14□□□□□ -0.15
YBX1P67809 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
YBX1P67809 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
YBX1P67809 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
YBX1P67809 AL161772.1-201ENST00000610494 4412 ntBASIC14.14□□□□□ -0.15
YBX1P67809 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
YBX1P67809 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.14□□□□□ -0.15
YBX1P67809 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
YBX1P67809 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
YBX1P67809 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.13□□□□□ -0.15
YBX1P67809 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
YBX1P67809 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.13□□□□□ -0.15
YBX1P67809 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.13□□□□□ -0.15
YBX1P67809 PCDHA3-202ENST00000532566 4594 ntBASIC14.13□□□□□ -0.15
YBX1P67809 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.13□□□□□ -0.15
YBX1P67809 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
YBX1P67809 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.13□□□□□ -0.15
YBX1P67809 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.13□□□□□ -0.15
YBX1P67809 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.13□□□□□ -0.15
YBX1P67809 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.13□□□□□ -0.15
YBX1P67809 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 ZNF767P-206ENST00000513792 565 ntBASIC14.13□□□□□ -0.15
YBX1P67809 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.13□□□□□ -0.15
YBX1P67809 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.13□□□□□ -0.15
YBX1P67809 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.13□□□□□ -0.15
YBX1P67809 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.13□□□□□ -0.15
YBX1P67809 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.13□□□□□ -0.15
YBX1P67809 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.13□□□□□ -0.15
YBX1P67809 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.13□□□□□ -0.15
YBX1P67809 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.13□□□□□ -0.15
YBX1P67809 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.13□□□□□ -0.15
YBX1P67809 Z98259.2-201ENST00000641583 609 ntBASIC14.13□□□□□ -0.15
YBX1P67809 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
YBX1P67809 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.13□□□□□ -0.15
YBX1P67809 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.13□□□□□ -0.15
YBX1P67809 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
YBX1P67809 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
YBX1P67809 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
YBX1P67809 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
YBX1P67809 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
YBX1P67809 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.13□□□□□ -0.15
YBX1P67809 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.12□□□□□ -0.15
YBX1P67809 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.12□□□□□ -0.15
YBX1P67809 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
YBX1P67809 AL157996.1-201ENST00000624684 2299 ntBASIC14.12□□□□□ -0.15
YBX1P67809 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.12□□□□□ -0.15
YBX1P67809 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
YBX1P67809 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.12□□□□□ -0.15
YBX1P67809 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
YBX1P67809 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
YBX1P67809 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
YBX1P67809 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.12□□□□□ -0.15
YBX1P67809 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
YBX1P67809 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
YBX1P67809 AL157407.1-201ENST00000435784 904 ntBASIC14.12□□□□□ -0.15
YBX1P67809 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.12□□□□□ -0.15
YBX1P67809 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.12□□□□□ -0.15
YBX1P67809 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.12□□□□□ -0.15
YBX1P67809 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
YBX1P67809 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.12□□□□□ -0.15
YBX1P67809 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.12□□□□□ -0.15
YBX1P67809 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
YBX1P67809 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
YBX1P67809 AC100827.2-201ENST00000563214 1194 ntBASIC14.12□□□□□ -0.15
YBX1P67809 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.12□□□□□ -0.15
YBX1P67809 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.12□□□□□ -0.15
YBX1P67809 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.12□□□□□ -0.15
YBX1P67809 AC005962.1-201ENST00000584100 773 ntBASIC14.12□□□□□ -0.15
YBX1P67809 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 AL118558.3-201ENST00000607414 1079 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms