Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
RPL39P62891 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC10.31□□□□□ -0.76
RPL39P62891 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
RPL39P62891 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC10.31□□□□□ -0.76
RPL39P62891 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
RPL39P62891 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC10.31□□□□□ -0.76
RPL39P62891 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC10.31□□□□□ -0.76
RPL39P62891 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC10.31□□□□□ -0.76
RPL39P62891 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC10.31□□□□□ -0.76
RPL39P62891 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC10.31□□□□□ -0.76
RPL39P62891 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC10.31□□□□□ -0.76
RPL39P62891 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC10.31□□□□□ -0.76
RPL39P62891 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC10.31□□□□□ -0.76
RPL39P62891 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
RPL39P62891 VDAC1P7-201ENST00000462417 847 ntBASIC10.31□□□□□ -0.76
RPL39P62891 MEIS3P1-201ENST00000495167 958 ntBASIC10.31□□□□□ -0.76
RPL39P62891 YBX1P5-201ENST00000509441 847 ntBASIC10.31□□□□□ -0.76
RPL39P62891 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC10.31□□□□□ -0.76
RPL39P62891 AC069262.1-201ENST00000539058 672 ntBASIC10.31□□□□□ -0.76
RPL39P62891 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
RPL39P62891 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
RPL39P62891 TEX48-202ENST00000612244 662 ntTSL 3 BASIC10.31□□□□□ -0.76
RPL39P62891 BX539320.1-201ENST00000623759 877 ntBASIC10.31□□□□□ -0.76
RPL39P62891 AC073592.8-201ENST00000624126 511 ntBASIC10.31□□□□□ -0.76
RPL39P62891 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC10.31□□□□□ -0.76
RPL39P62891 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC10.31□□□□□ -0.76
RPL39P62891 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC10.31□□□□□ -0.76
RPL39P62891 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC10.31□□□□□ -0.76
RPL39P62891 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC10.31□□□□□ -0.76
RPL39P62891 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
RPL39P62891 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
RPL39P62891 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
RPL39P62891 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC10.31□□□□□ -0.76
RPL39P62891 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
RPL39P62891 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
RPL39P62891 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
RPL39P62891 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC10.3□□□□□ -0.76
RPL39P62891 CARS-214ENST00000529772 2637 ntTSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
RPL39P62891 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
RPL39P62891 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC10.3□□□□□ -0.76
RPL39P62891 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
RPL39P62891 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
RPL39P62891 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 FAM86LP-201ENST00000478302 853 ntBASIC10.3□□□□□ -0.76
RPL39P62891 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC10.3□□□□□ -0.76
RPL39P62891 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.3□□□□□ -0.76
RPL39P62891 AC092865.5-201ENST00000545435 363 ntBASIC10.3□□□□□ -0.76
RPL39P62891 AL512356.2-201ENST00000546955 174 ntBASIC10.3□□□□□ -0.76
RPL39P62891 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC10.3□□□□□ -0.76
RPL39P62891 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 AC138761.1-201ENST00000584393 385 ntBASIC10.3□□□□□ -0.76
RPL39P62891 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 AL391069.4-201ENST00000609583 481 ntBASIC10.3□□□□□ -0.76
RPL39P62891 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms