Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CKS1BP61024 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CKS1BP61024 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC10.29□□□□□ -0.76
CKS1BP61024 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC10.29□□□□□ -0.76
CKS1BP61024 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
CKS1BP61024 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
CKS1BP61024 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC10.29□□□□□ -0.76
CKS1BP61024 CSPG4P13-202ENST00000567704 4801 ntBASIC10.29□□□□□ -0.76
CKS1BP61024 AC009093.2-202ENST00000620513 2079 ntBASIC10.29□□□□□ -0.76
CKS1BP61024 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 SHROOM2P1-201ENST00000434773 2384 ntBASIC10.29□□□□□ -0.76
CKS1BP61024 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC10.29□□□□□ -0.76
CKS1BP61024 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC10.29□□□□□ -0.76
CKS1BP61024 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 YBX2P1-201ENST00000394192 760 ntBASIC10.29□□□□□ -0.76
CKS1BP61024 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.29□□□□□ -0.76
CKS1BP61024 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC10.29□□□□□ -0.76
CKS1BP61024 AC009078.2-202ENST00000463353 338 ntBASIC10.29□□□□□ -0.76
CKS1BP61024 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC10.29□□□□□ -0.76
CKS1BP61024 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC10.29□□□□□ -0.76
CKS1BP61024 KRT8P48-201ENST00000515599 1220 ntBASIC10.29□□□□□ -0.76
CKS1BP61024 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 KRT126P-201ENST00000549467 1181 ntBASIC10.29□□□□□ -0.76
CKS1BP61024 RPL18-209ENST00000550645 463 ntTSL 5 BASIC10.29□□□□□ -0.76
CKS1BP61024 RPL18-214ENST00000552588 559 ntTSL 3 BASIC10.29□□□□□ -0.76
CKS1BP61024 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC10.29□□□□□ -0.76
CKS1BP61024 AC105021.1-202ENST00000570572 669 ntBASIC10.29□□□□□ -0.76
CKS1BP61024 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC10.29□□□□□ -0.76
CKS1BP61024 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 ADPRH-201ENST00000357003 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 AC011481.3-201ENST00000623895 5594 ntBASIC10.29□□□□□ -0.76
CKS1BP61024 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
CKS1BP61024 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
CKS1BP61024 AC080128.2-201ENST00000641520 11863 ntBASIC10.29□□□□□ -0.76
CKS1BP61024 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC10.29□□□□□ -0.76
CKS1BP61024 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC10.29□□□□□ -0.76
CKS1BP61024 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC10.29□□□□□ -0.76
CKS1BP61024 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
CKS1BP61024 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.29□□□□□ -0.76
CKS1BP61024 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
CKS1BP61024 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CKS1BP61024 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CKS1BP61024 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CKS1BP61024 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
CKS1BP61024 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC10.28□□□□□ -0.76
CKS1BP61024 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.28□□□□□ -0.76
CKS1BP61024 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CKS1BP61024 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC10.28□□□□□ -0.76
CKS1BP61024 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
CKS1BP61024 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CKS1BP61024 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CKS1BP61024 OS9-203ENST00000389142 2457 ntTSL 5 BASIC10.28□□□□□ -0.76
CKS1BP61024 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
CKS1BP61024 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC10.28□□□□□ -0.76
CKS1BP61024 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CKS1BP61024 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CKS1BP61024 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CKS1BP61024 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC10.28□□□□□ -0.76
CKS1BP61024 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
CKS1BP61024 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
CKS1BP61024 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms