Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 AC190387.1-201ENST00000551683 408 ntBASIC13.6□□□□□ -0.23
CDH12P55289 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CDH12P55289 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.6□□□□□ -0.23
CDH12P55289 AL033527.5-201ENST00000641382 801 ntBASIC13.6□□□□□ -0.23
CDH12P55289 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
CDH12P55289 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.6□□□□□ -0.23
CDH12P55289 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.6□□□□□ -0.23
CDH12P55289 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CDH12P55289 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.6□□□□□ -0.23
CDH12P55289 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 AL359183.1-201ENST00000623796 2132 ntBASIC13.6□□□□□ -0.23
CDH12P55289 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.6□□□□□ -0.23
CDH12P55289 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.6□□□□□ -0.23
CDH12P55289 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.59□□□□□ -0.23
CDH12P55289 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.59□□□□□ -0.23
CDH12P55289 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CDH12P55289 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CDH12P55289 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.59□□□□□ -0.23
CDH12P55289 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.59□□□□□ -0.23
CDH12P55289 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.59□□□□□ -0.23
CDH12P55289 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CDH12P55289 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.59□□□□□ -0.23
CDH12P55289 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.59□□□□□ -0.23
CDH12P55289 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.59□□□□□ -0.23
CDH12P55289 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.59□□□□□ -0.23
CDH12P55289 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.59□□□□□ -0.23
CDH12P55289 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.59□□□□□ -0.23
CDH12P55289 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.59□□□□□ -0.23
CDH12P55289 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.59□□□□□ -0.23
CDH12P55289 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CDH12P55289 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.59□□□□□ -0.23
CDH12P55289 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.59□□□□□ -0.23
CDH12P55289 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 AC004899.2-201ENST00000622993 3860 ntBASIC13.59□□□□□ -0.23
CDH12P55289 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH12P55289 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.59□□□□□ -0.23
CDH12P55289 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
CDH12P55289 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.59□□□□□ -0.23
CDH12P55289 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.58□□□□□ -0.23
CDH12P55289 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.58□□□□□ -0.23
CDH12P55289 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDH12P55289 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
CDH12P55289 PCDHA5-203ENST00000614258 4248 ntBASIC13.58□□□□□ -0.24
CDH12P55289 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH12P55289 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CDH12P55289 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CDH12P55289 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.58□□□□□ -0.24
CDH12P55289 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH12P55289 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDH12P55289 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CDH12P55289 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CDH12P55289 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH12P55289 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
CDH12P55289 RN7SKP230-201ENST00000365642 335 ntBASIC13.58□□□□□ -0.24
CDH12P55289 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.58□□□□□ -0.24
CDH12P55289 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.58□□□□□ -0.24
CDH12P55289 GCOM2-201ENST00000509133 1104 ntBASIC13.58□□□□□ -0.24
CDH12P55289 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.58□□□□□ -0.24
CDH12P55289 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.58□□□□□ -0.24
CDH12P55289 TP53TG3HP-202ENST00000569755 579 ntBASIC13.58□□□□□ -0.24
CDH12P55289 MIR4745-201ENST00000577608 62 ntBASIC13.58□□□□□ -0.24
CDH12P55289 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.58□□□□□ -0.24
CDH12P55289 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CDH12P55289 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDH12P55289 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
CDH12P55289 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.58□□□□□ -0.24
CDH12P55289 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDH12P55289 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.58□□□□□ -0.24
CDH12P55289 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH12P55289 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CDH12P55289 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms