Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH6P55285 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH6P55285 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH6P55285 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH6P55285 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH6P55285 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH6P55285 AL023775.1-201ENST00000454907 1746 ntBASIC15.13■□□□□ 0.01
CDH6P55285 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH6P55285 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CDH6P55285 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH6P55285 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH6P55285 DUX4L46-201ENST00000566845 751 ntBASIC15.13■□□□□ 0.01
CDH6P55285 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH6P55285 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH6P55285 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH6P55285 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH6P55285 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH6P55285 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDH6P55285 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH6P55285 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CDH6P55285 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH6P55285 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH6P55285 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH6P55285 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH6P55285 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH6P55285 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDH6P55285 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH6P55285 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH6P55285 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH6P55285 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH6P55285 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CDH6P55285 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDH6P55285 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
CDH6P55285 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH6P55285 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 AC022210.1-201ENST00000449856 793 ntBASIC15.12■□□□□ 0.01
CDH6P55285 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH6P55285 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.12■□□□□ 0.01
CDH6P55285 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CDH6P55285 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH6P55285 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH6P55285 AC133552.6-201ENST00000613406 534 ntBASIC15.12■□□□□ 0.01
CDH6P55285 MIR6805-201ENST00000615055 62 ntBASIC15.12■□□□□ 0.01
CDH6P55285 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDH6P55285 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 TUBB8P4-201ENST00000511806 1324 ntBASIC15.12■□□□□ 0.01
CDH6P55285 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDH6P55285 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH6P55285 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDH6P55285 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH6P55285 TMBIM7P-202ENST00000641474 1516 ntBASIC15.12■□□□□ 0.01
CDH6P55285 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH6P55285 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CDH6P55285 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH6P55285 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CDH6P55285 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH6P55285 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH6P55285 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH6P55285 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH6P55285 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.11■□□□□ 0.01
CDH6P55285 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH6P55285 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDH6P55285 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDH6P55285 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH6P55285 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH6P55285 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH6P55285 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDH6P55285 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH6P55285 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CDH6P55285 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH6P55285 AC090643.2-201ENST00000623442 2029 ntBASIC15.11■□□□□ 0.01
CDH6P55285 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH6P55285 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH6P55285 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH6P55285 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH6P55285 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH6P55285 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.11■□□□□ 0.01
CDH6P55285 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CDH6P55285 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.11■□□□□ 0.01
CDH6P55285 IGHV3-71-201ENST00000523324 359 ntBASIC15.11■□□□□ 0.01
CDH6P55285 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.11■□□□□ 0.01
CDH6P55285 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.11■□□□□ 0.01
CDH6P55285 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.11■□□□□ 0.01
CDH6P55285 AC104506.1-201ENST00000609247 429 ntBASIC15.11■□□□□ 0.01
CDH6P55285 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms