Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL121772.3-201ENST00000610840 674 ntBASIC14.27□□□□□ -0.13
GTF2A1P52655 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
GTF2A1P52655 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
GTF2A1P52655 EPHB6-202ENST00000422643 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GTF2A1P52655 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GTF2A1P52655 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GTF2A1P52655 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GTF2A1P52655 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
GTF2A1P52655 AL713866.1-201ENST00000563320 3125 ntBASIC14.27□□□□□ -0.13
GTF2A1P52655 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC14.27□□□□□ -0.13
GTF2A1P52655 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GTF2A1P52655 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC14.27□□□□□ -0.13
GTF2A1P52655 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
GTF2A1P52655 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
GTF2A1P52655 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GTF2A1P52655 MED24-201ENST00000356271 3446 ntTSL 2 BASIC14.27□□□□□ -0.13
GTF2A1P52655 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GTF2A1P52655 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
GTF2A1P52655 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 CADM3-202ENST00000368125 3745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC14.26□□□□□ -0.13
GTF2A1P52655 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.26□□□□□ -0.13
GTF2A1P52655 TUSC5-201ENST00000333813 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC14.26□□□□□ -0.13
GTF2A1P52655 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC14.26□□□□□ -0.13
GTF2A1P52655 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.26□□□□□ -0.13
GTF2A1P52655 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
GTF2A1P52655 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
GTF2A1P52655 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
GTF2A1P52655 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.26□□□□□ -0.13
GTF2A1P52655 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.26□□□□□ -0.13
GTF2A1P52655 AC245100.5-201ENST00000452108 331 ntBASIC14.26□□□□□ -0.13
GTF2A1P52655 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.26□□□□□ -0.13
GTF2A1P52655 OR7E14P-202ENST00000530490 1290 ntBASIC14.26□□□□□ -0.13
GTF2A1P52655 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
GTF2A1P52655 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.26□□□□□ -0.13
GTF2A1P52655 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC14.26□□□□□ -0.13
GTF2A1P52655 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GTF2A1P52655 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GTF2A1P52655 NLRP2-206ENST00000427260 3411 ntTSL 2 BASIC14.26□□□□□ -0.13
GTF2A1P52655 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
GTF2A1P52655 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.26□□□□□ -0.13
GTF2A1P52655 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GTF2A1P52655 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC14.26□□□□□ -0.13
GTF2A1P52655 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
GTF2A1P52655 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GTF2A1P52655 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
GTF2A1P52655 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GTF2A1P52655 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GTF2A1P52655 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.25□□□□□ -0.13
GTF2A1P52655 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GTF2A1P52655 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.25□□□□□ -0.13
GTF2A1P52655 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GTF2A1P52655 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GTF2A1P52655 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
GTF2A1P52655 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
GTF2A1P52655 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GTF2A1P52655 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GTF2A1P52655 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.25□□□□□ -0.13
GTF2A1P52655 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
GTF2A1P52655 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GTF2A1P52655 MRPL20P1-201ENST00000400819 433 ntBASIC14.25□□□□□ -0.13
GTF2A1P52655 TSPY19P-201ENST00000418461 509 ntBASIC14.25□□□□□ -0.13
GTF2A1P52655 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.25□□□□□ -0.13
GTF2A1P52655 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.25□□□□□ -0.13
GTF2A1P52655 TSPY18P-201ENST00000441642 509 ntBASIC14.25□□□□□ -0.13
GTF2A1P52655 FAM185BP-201ENST00000443595 716 ntBASIC14.25□□□□□ -0.13
GTF2A1P52655 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.25□□□□□ -0.13
GTF2A1P52655 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
GTF2A1P52655 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.25□□□□□ -0.13
GTF2A1P52655 AC091304.2-201ENST00000564639 760 ntBASIC14.25□□□□□ -0.13
GTF2A1P52655 MIR3652-201ENST00000579335 131 ntBASIC14.25□□□□□ -0.13
GTF2A1P52655 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.25□□□□□ -0.13
GTF2A1P52655 AC004790.2-201ENST00000623588 572 ntBASIC14.25□□□□□ -0.13
GTF2A1P52655 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms