Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RNF144AP50876 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF144AP50876 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.6□□□□□ -0.23
RNF144AP50876 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF144AP50876 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.6□□□□□ -0.23
RNF144AP50876 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF144AP50876 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.6□□□□□ -0.23
RNF144AP50876 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF144AP50876 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.6□□□□□ -0.23
RNF144AP50876 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 MYADML-201ENST00000474610 2147 ntBASIC13.6□□□□□ -0.23
RNF144AP50876 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.6□□□□□ -0.23
RNF144AP50876 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
RNF144AP50876 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF144AP50876 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RNF144AP50876 AC234783.1-201ENST00000441761 496 ntBASIC13.6□□□□□ -0.23
RNF144AP50876 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.6□□□□□ -0.23
RNF144AP50876 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF144AP50876 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.6□□□□□ -0.23
RNF144AP50876 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
RNF144AP50876 RAB43P1-201ENST00000561790 589 ntBASIC13.6□□□□□ -0.23
RNF144AP50876 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF144AP50876 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF144AP50876 AC132938.4-201ENST00000623835 848 ntBASIC13.6□□□□□ -0.23
RNF144AP50876 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF144AP50876 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF144AP50876 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RNF144AP50876 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF144AP50876 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.6□□□□□ -0.23
RNF144AP50876 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.6□□□□□ -0.23
RNF144AP50876 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF144AP50876 MST1P2-201ENST00000457982 2291 ntBASIC13.6□□□□□ -0.23
RNF144AP50876 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RNF144AP50876 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.6□□□□□ -0.23
RNF144AP50876 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF144AP50876 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RNF144AP50876 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RNF144AP50876 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 MEX3B-202ENST00000558133 4333 ntBASIC13.59□□□□□ -0.23
RNF144AP50876 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 AC079776.1-201ENST00000401540 1152 ntBASIC13.59□□□□□ -0.23
RNF144AP50876 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.59□□□□□ -0.23
RNF144AP50876 AC004945.1-201ENST00000416738 983 ntBASIC13.59□□□□□ -0.23
RNF144AP50876 CNN2P8-201ENST00000421872 913 ntBASIC13.59□□□□□ -0.23
RNF144AP50876 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.59□□□□□ -0.23
RNF144AP50876 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.59□□□□□ -0.23
RNF144AP50876 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
RNF144AP50876 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF144AP50876 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.59□□□□□ -0.23
RNF144AP50876 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.59□□□□□ -0.23
RNF144AP50876 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF144AP50876 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RNF144AP50876 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.59□□□□□ -0.23
RNF144AP50876 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.59□□□□□ -0.23
RNF144AP50876 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF144AP50876 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.59□□□□□ -0.23
RNF144AP50876 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RNF144AP50876 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RNF144AP50876 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF144AP50876 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.59□□□□□ -0.23
RNF144AP50876 AC006453.4-201ENST00000636949 1252 ntBASIC13.59□□□□□ -0.23
RNF144AP50876 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms