Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RXRBP28702 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RXRBP28702 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.38■□□□□ 0.53
RXRBP28702 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.38■□□□□ 0.53
RXRBP28702 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC18.38■□□□□ 0.53
RXRBP28702 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RXRBP28702 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.38■□□□□ 0.53
RXRBP28702 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RXRBP28702 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.38■□□□□ 0.53
RXRBP28702 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
RXRBP28702 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.38■□□□□ 0.53
RXRBP28702 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RXRBP28702 Z98885.3-201ENST00000624882 1757 ntBASIC18.38■□□□□ 0.53
RXRBP28702 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RXRBP28702 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RXRBP28702 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RXRBP28702 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RXRBP28702 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RXRBP28702 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RXRBP28702 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC18.38■□□□□ 0.53
RXRBP28702 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RXRBP28702 RPSAP6-201ENST00000417882 882 ntBASIC18.38■□□□□ 0.53
RXRBP28702 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC18.38■□□□□ 0.53
RXRBP28702 RN7SL452P-201ENST00000482923 291 ntBASIC18.38■□□□□ 0.53
RXRBP28702 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
RXRBP28702 NEMF-210ENST00000556672 590 ntTSL 2 BASIC18.38■□□□□ 0.53
RXRBP28702 AC022382.1-201ENST00000602768 336 ntBASIC18.38■□□□□ 0.53
RXRBP28702 AC116036.2-201ENST00000607592 462 ntBASIC18.38■□□□□ 0.53
RXRBP28702 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RXRBP28702 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RXRBP28702 PAX6-247ENST00000638965 979 ntTSL 5 BASIC18.38■□□□□ 0.53
RXRBP28702 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RXRBP28702 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RXRBP28702 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.38■□□□□ 0.53
RXRBP28702 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RXRBP28702 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RXRBP28702 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RXRBP28702 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.38■□□□□ 0.53
RXRBP28702 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RXRBP28702 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RXRBP28702 IMPDH1P5-201ENST00000439688 1540 ntBASIC18.38■□□□□ 0.53
RXRBP28702 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.38■□□□□ 0.53
RXRBP28702 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.38■□□□□ 0.53
RXRBP28702 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RXRBP28702 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RXRBP28702 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
RXRBP28702 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.37■□□□□ 0.53
RXRBP28702 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.37■□□□□ 0.53
RXRBP28702 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC18.37■□□□□ 0.53
RXRBP28702 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC18.37■□□□□ 0.53
RXRBP28702 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC18.37■□□□□ 0.53
RXRBP28702 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 POLR3DP1-201ENST00000398689 1176 ntBASIC18.37■□□□□ 0.53
RXRBP28702 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RXRBP28702 Z84721.1-201ENST00000438841 372 ntBASIC18.37■□□□□ 0.53
RXRBP28702 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC18.37■□□□□ 0.53
RXRBP28702 PARVG-208ENST00000466375 820 ntTSL 2 BASIC18.37■□□□□ 0.53
RXRBP28702 COQ10BP2-201ENST00000513804 724 ntBASIC18.37■□□□□ 0.53
RXRBP28702 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC18.37■□□□□ 0.53
RXRBP28702 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC18.37■□□□□ 0.53
RXRBP28702 AC063977.2-201ENST00000601996 421 ntBASIC18.37■□□□□ 0.53
RXRBP28702 AL078624.1-201ENST00000604004 547 ntBASIC18.37■□□□□ 0.53
RXRBP28702 AC009812.1-201ENST00000605948 1059 ntBASIC18.37■□□□□ 0.53
RXRBP28702 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 MIR6871-201ENST00000613433 56 ntBASIC18.37■□□□□ 0.53
RXRBP28702 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 AC026271.1-201ENST00000447794 1348 ntBASIC18.37■□□□□ 0.53
RXRBP28702 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RXRBP28702 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 AGGF1P2-201ENST00000426656 2106 ntBASIC18.37■□□□□ 0.53
RXRBP28702 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
RXRBP28702 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RXRBP28702 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RXRBP28702 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RXRBP28702 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RXRBP28702 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RXRBP28702 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RXRBP28702 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RXRBP28702 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RXRBP28702 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RXRBP28702 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RXRBP28702 SERPINB8P1-201ENST00000401898 377 ntBASIC18.36■□□□□ 0.53
RXRBP28702 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RXRBP28702 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RXRBP28702 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC18.36■□□□□ 0.53
RXRBP28702 RBMX2P5-201ENST00000424312 969 ntBASIC18.36■□□□□ 0.53
RXRBP28702 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC18.36■□□□□ 0.53
RXRBP28702 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms