Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.39□□□□□ -0.27
ABCD3P28288 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 AC099548.2-209ENST00000480264 625 ntBASIC13.39□□□□□ -0.27
ABCD3P28288 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.39□□□□□ -0.27
ABCD3P28288 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.39□□□□□ -0.27
ABCD3P28288 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.39□□□□□ -0.27
ABCD3P28288 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.39□□□□□ -0.27
ABCD3P28288 AC138649.2-201ENST00000615886 705 ntBASIC13.39□□□□□ -0.27
ABCD3P28288 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.39□□□□□ -0.27
ABCD3P28288 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ABCD3P28288 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.39□□□□□ -0.27
ABCD3P28288 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.39□□□□□ -0.27
ABCD3P28288 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
ABCD3P28288 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ABCD3P28288 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.38□□□□□ -0.27
ABCD3P28288 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ABCD3P28288 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.38□□□□□ -0.27
ABCD3P28288 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.38□□□□□ -0.27
ABCD3P28288 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.38□□□□□ -0.27
ABCD3P28288 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 KRT18P36-201ENST00000411618 1276 ntBASIC13.38□□□□□ -0.27
ABCD3P28288 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.38□□□□□ -0.27
ABCD3P28288 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.38□□□□□ -0.27
ABCD3P28288 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.38□□□□□ -0.27
ABCD3P28288 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 MARK2P5-201ENST00000507649 634 ntBASIC13.38□□□□□ -0.27
ABCD3P28288 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.38□□□□□ -0.27
ABCD3P28288 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 AC003686.1-201ENST00000550956 1034 ntBASIC13.38□□□□□ -0.27
ABCD3P28288 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.38□□□□□ -0.27
ABCD3P28288 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.38□□□□□ -0.27
ABCD3P28288 AC124068.2-201ENST00000569473 1109 ntBASIC13.38□□□□□ -0.27
ABCD3P28288 AC020914.3-201ENST00000594712 304 ntBASIC13.38□□□□□ -0.27
ABCD3P28288 AL132994.2-201ENST00000603120 687 ntBASIC13.38□□□□□ -0.27
ABCD3P28288 GPR182-203ENST00000622922 591 ntBASIC13.38□□□□□ -0.27
ABCD3P28288 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.38□□□□□ -0.27
ABCD3P28288 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.38□□□□□ -0.27
ABCD3P28288 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ABCD3P28288 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.38□□□□□ -0.27
ABCD3P28288 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.38□□□□□ -0.27
ABCD3P28288 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.38□□□□□ -0.27
ABCD3P28288 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
ABCD3P28288 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCD3P28288 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.38□□□□□ -0.27
ABCD3P28288 AHCYP4-201ENST00000419201 1315 ntBASIC13.38□□□□□ -0.27
ABCD3P28288 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.38□□□□□ -0.27
ABCD3P28288 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.37□□□□□ -0.27
ABCD3P28288 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.37□□□□□ -0.27
ABCD3P28288 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.37□□□□□ -0.27
ABCD3P28288 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms