Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ATF1P18846 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ATF1P18846 MYCLP2-201ENST00000449268 967 ntBASIC12.8□□□□□ -0.36
ATF1P18846 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.8□□□□□ -0.36
ATF1P18846 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.8□□□□□ -0.36
ATF1P18846 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.8□□□□□ -0.36
ATF1P18846 ENPP7P5-201ENST00000541031 1031 ntBASIC12.8□□□□□ -0.36
ATF1P18846 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.8□□□□□ -0.36
ATF1P18846 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.8□□□□□ -0.36
ATF1P18846 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ATF1P18846 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.8□□□□□ -0.36
ATF1P18846 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.8□□□□□ -0.36
ATF1P18846 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.8□□□□□ -0.36
ATF1P18846 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ATF1P18846 AL122018.1-201ENST00000446607 2310 ntBASIC12.8□□□□□ -0.36
ATF1P18846 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ATF1P18846 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.8□□□□□ -0.36
ATF1P18846 AL138725.1-201ENST00000407347 1314 ntBASIC12.8□□□□□ -0.36
ATF1P18846 TUBB8P4-201ENST00000511806 1324 ntBASIC12.8□□□□□ -0.36
ATF1P18846 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ATF1P18846 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.8□□□□□ -0.36
ATF1P18846 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.8□□□□□ -0.36
ATF1P18846 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.8□□□□□ -0.36
ATF1P18846 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ATF1P18846 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
ATF1P18846 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ATF1P18846 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ATF1P18846 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.79□□□□□ -0.36
ATF1P18846 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.79□□□□□ -0.36
ATF1P18846 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 AC007541.1-201ENST00000570282 1469 ntBASIC12.79□□□□□ -0.36
ATF1P18846 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
ATF1P18846 AC004899.2-201ENST00000622993 3860 ntBASIC12.79□□□□□ -0.36
ATF1P18846 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 AC135782.3-201ENST00000562782 2105 ntBASIC12.79□□□□□ -0.36
ATF1P18846 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ATF1P18846 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.79□□□□□ -0.36
ATF1P18846 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.79□□□□□ -0.36
ATF1P18846 UGT1A2P-201ENST00000454886 866 ntBASIC12.79□□□□□ -0.36
ATF1P18846 FO681548.1-201ENST00000455617 1132 ntBASIC12.79□□□□□ -0.36
ATF1P18846 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.79□□□□□ -0.36
ATF1P18846 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.79□□□□□ -0.36
ATF1P18846 AC131206.1-201ENST00000538078 1211 ntBASIC12.79□□□□□ -0.36
ATF1P18846 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.79□□□□□ -0.36
ATF1P18846 AP001063.1-201ENST00000568332 529 ntBASIC12.79□□□□□ -0.36
ATF1P18846 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.79□□□□□ -0.36
ATF1P18846 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 AC004466.1-201ENST00000599515 1080 ntBASIC12.79□□□□□ -0.36
ATF1P18846 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.79□□□□□ -0.36
ATF1P18846 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.79□□□□□ -0.36
ATF1P18846 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.79□□□□□ -0.36
ATF1P18846 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ATF1P18846 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.79□□□□□ -0.36
ATF1P18846 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.79□□□□□ -0.36
ATF1P18846 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
ATF1P18846 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms