Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC8.66□□□□□ -1.02
APOBP04114 AL022313.4-201ENST00000562756 2046 ntBASIC8.66□□□□□ -1.02
APOBP04114 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC8.66□□□□□ -1.02
APOBP04114 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
APOBP04114 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
APOBP04114 HNRNPA3P12-201ENST00000437410 1063 ntBASIC8.66□□□□□ -1.02
APOBP04114 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC8.66□□□□□ -1.02
APOBP04114 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
APOBP04114 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC8.66□□□□□ -1.02
APOBP04114 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
APOBP04114 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 PARN-202ENST00000420015 2360 ntTSL 2 BASIC8.66□□□□□ -1.02
APOBP04114 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC8.66□□□□□ -1.02
APOBP04114 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC8.66□□□□□ -1.02
APOBP04114 RN7SL794P-201ENST00000469816 280 ntBASIC8.66□□□□□ -1.02
APOBP04114 RNF7-205ENST00000480908 782 ntTSL 4 BASIC8.66□□□□□ -1.02
APOBP04114 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC8.66□□□□□ -1.02
APOBP04114 AC004801.1-201ENST00000549557 360 ntBASIC8.66□□□□□ -1.02
APOBP04114 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC8.66□□□□□ -1.02
APOBP04114 MIR6165-201ENST00000614803 84 ntBASIC8.66□□□□□ -1.02
APOBP04114 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
APOBP04114 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
APOBP04114 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
APOBP04114 MECR-202ENST00000373791 2416 ntTSL 2 BASIC8.66□□□□□ -1.02
APOBP04114 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
APOBP04114 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
APOBP04114 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC8.66□□□□□ -1.02
APOBP04114 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 AC093106.1-201ENST00000437271 352 ntBASIC8.66□□□□□ -1.02
APOBP04114 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC8.66□□□□□ -1.02
APOBP04114 AC090616.6-202ENST00000583601 1088 ntBASIC8.66□□□□□ -1.02
APOBP04114 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
APOBP04114 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
APOBP04114 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
APOBP04114 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
APOBP04114 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
APOBP04114 AC127002.1-201ENST00000619123 455 ntBASIC8.66□□□□□ -1.02
APOBP04114 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC8.66□□□□□ -1.02
APOBP04114 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC8.66□□□□□ -1.02
APOBP04114 AC013268.4-201ENST00000637413 2228 ntBASIC8.66□□□□□ -1.02
APOBP04114 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
APOBP04114 AC012617.1-204ENST00000586340 2305 ntBASIC8.65□□□□□ -1.02
APOBP04114 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 POP5-201ENST00000341039 913 ntTSL 2 BASIC8.65□□□□□ -1.02
APOBP04114 AC010086.2-201ENST00000428616 226 ntBASIC8.65□□□□□ -1.02
APOBP04114 GYG1-209ENST00000483267 801 ntTSL 2 BASIC8.65□□□□□ -1.02
APOBP04114 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC8.65□□□□□ -1.02
APOBP04114 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC8.65□□□□□ -1.02
APOBP04114 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC8.65□□□□□ -1.02
APOBP04114 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
APOBP04114 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC8.65□□□□□ -1.02
APOBP04114 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC8.65□□□□□ -1.02
APOBP04114 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
APOBP04114 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC8.65□□□□□ -1.02
APOBP04114 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC8.65□□□□□ -1.02
APOBP04114 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC8.65□□□□□ -1.02
APOBP04114 AL591499.1-201ENST00000307155 1153 ntBASIC8.65□□□□□ -1.02
APOBP04114 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
APOBP04114 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC8.65□□□□□ -1.02
APOBP04114 RN7SKP212-201ENST00000410851 328 ntBASIC8.65□□□□□ -1.02
APOBP04114 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC8.65□□□□□ -1.02
APOBP04114 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC8.65□□□□□ -1.02
APOBP04114 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 HNRNPA1P56-201ENST00000505767 954 ntBASIC8.65□□□□□ -1.02
APOBP04114 CCNL2P1-201ENST00000512846 969 ntBASIC8.65□□□□□ -1.02
APOBP04114 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms