Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.14□□□□□ -0.15
KRT6AP02538 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6AP02538 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.14□□□□□ -0.15
KRT6AP02538 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6AP02538 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
KRT6AP02538 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6AP02538 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6AP02538 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
KRT6AP02538 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6AP02538 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6AP02538 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6AP02538 AC064801.2-201ENST00000625052 1303 ntBASIC14.14□□□□□ -0.15
KRT6AP02538 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6AP02538 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
KRT6AP02538 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.13□□□□□ -0.15
KRT6AP02538 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
KRT6AP02538 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KRT6AP02538 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 KRT8P28-201ENST00000433288 1390 ntBASIC14.13□□□□□ -0.15
KRT6AP02538 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KRT6AP02538 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KRT6AP02538 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
KRT6AP02538 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.13□□□□□ -0.15
KRT6AP02538 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.13□□□□□ -0.15
KRT6AP02538 AC016694.1-201ENST00000434179 700 ntBASIC14.13□□□□□ -0.15
KRT6AP02538 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.13□□□□□ -0.15
KRT6AP02538 AL590640.2-201ENST00000457038 527 ntBASIC14.13□□□□□ -0.15
KRT6AP02538 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.13□□□□□ -0.15
KRT6AP02538 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.13□□□□□ -0.15
KRT6AP02538 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.13□□□□□ -0.15
KRT6AP02538 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.13□□□□□ -0.15
KRT6AP02538 AC005586.2-201ENST00000563946 837 ntBASIC14.13□□□□□ -0.15
KRT6AP02538 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
KRT6AP02538 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
KRT6AP02538 AC233724.13-201ENST00000598383 410 ntBASIC14.13□□□□□ -0.15
KRT6AP02538 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.13□□□□□ -0.15
KRT6AP02538 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.13□□□□□ -0.15
KRT6AP02538 AC008825.2-201ENST00000603374 718 ntBASIC14.13□□□□□ -0.15
KRT6AP02538 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.13□□□□□ -0.15
KRT6AP02538 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.13□□□□□ -0.15
KRT6AP02538 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.13□□□□□ -0.15
KRT6AP02538 AC025048.6-201ENST00000634326 1161 ntBASIC14.13□□□□□ -0.15
KRT6AP02538 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
KRT6AP02538 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
KRT6AP02538 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.13□□□□□ -0.15
KRT6AP02538 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.13□□□□□ -0.15
KRT6AP02538 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
KRT6AP02538 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.13□□□□□ -0.15
KRT6AP02538 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
KRT6AP02538 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 TUBB8P4-201ENST00000511806 1324 ntBASIC14.13□□□□□ -0.15
KRT6AP02538 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.13□□□□□ -0.15
KRT6AP02538 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6AP02538 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT6AP02538 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT6AP02538 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
KRT6AP02538 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
KRT6AP02538 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT6AP02538 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT6AP02538 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT6AP02538 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 AL354989.2-201ENST00000435838 1540 ntBASIC14.12□□□□□ -0.15
KRT6AP02538 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.12□□□□□ -0.15
KRT6AP02538 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.12□□□□□ -0.15
KRT6AP02538 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.12□□□□□ -0.15
KRT6AP02538 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRT6AP02538 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.12□□□□□ -0.15
KRT6AP02538 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms