Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.07■□□□□ 0
LRCH4O75427 AC021016.3-201ENST00000608367 477 ntBASIC15.07■□□□□ 0
LRCH4O75427 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH4O75427 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.07■□□□□ 0
LRCH4O75427 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH4O75427 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH4O75427 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
LRCH4O75427 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH4O75427 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.07■□□□□ 0
LRCH4O75427 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH4O75427 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.07■□□□□ 0
LRCH4O75427 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH4O75427 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH4O75427 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
LRCH4O75427 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH4O75427 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.07■□□□□ 0
LRCH4O75427 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LRCH4O75427 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
LRCH4O75427 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.06■□□□□ 0
LRCH4O75427 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.06■□□□□ 0
LRCH4O75427 AC104581.4-201ENST00000623126 3052 ntBASIC15.06■□□□□ 0
LRCH4O75427 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LRCH4O75427 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.06■□□□□ 0
LRCH4O75427 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.06■□□□□ 0
LRCH4O75427 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 KRT18P36-201ENST00000411618 1276 ntBASIC15.06■□□□□ 0
LRCH4O75427 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.06■□□□□ 0
LRCH4O75427 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.06■□□□□ 0
LRCH4O75427 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.06■□□□□ 0
LRCH4O75427 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.06■□□□□ 0
LRCH4O75427 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.06■□□□□ 0
LRCH4O75427 FAM86HP-204ENST00000513466 959 ntBASIC15.06■□□□□ 0
LRCH4O75427 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.06■□□□□ 0
LRCH4O75427 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
LRCH4O75427 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.06■□□□□ 0
LRCH4O75427 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.06■□□□□ 0
LRCH4O75427 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.06■□□□□ 0
LRCH4O75427 BAP1-211ENST00000615113 489 ntBASIC15.06■□□□□ 0
LRCH4O75427 AC133540.1-201ENST00000620845 1019 ntBASIC15.06■□□□□ 0
LRCH4O75427 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.06■□□□□ 0
LRCH4O75427 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.06■□□□□ 0
LRCH4O75427 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LRCH4O75427 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LRCH4O75427 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.06■□□□□ 0
LRCH4O75427 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.06■□□□□ 0
LRCH4O75427 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.06■□□□□ 0
LRCH4O75427 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.06■□□□□ 0
LRCH4O75427 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LRCH4O75427 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.06■□□□□ 0
LRCH4O75427 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH4O75427 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
LRCH4O75427 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
LRCH4O75427 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
LRCH4O75427 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.05■□□□□ 0
LRCH4O75427 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LRCH4O75427 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.05■□□□□ 0
LRCH4O75427 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LRCH4O75427 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.05■□□□□ 0
LRCH4O75427 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRCH4O75427 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRCH4O75427 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRCH4O75427 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRCH4O75427 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRCH4O75427 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.05■□□□□ -0
LRCH4O75427 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRCH4O75427 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.05■□□□□ -0
LRCH4O75427 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRCH4O75427 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LRCH4O75427 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRCH4O75427 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.05■□□□□ -0
LRCH4O75427 AC022217.1-201ENST00000521069 738 ntBASIC15.05■□□□□ -0
LRCH4O75427 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.05■□□□□ -0
LRCH4O75427 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.05■□□□□ -0
LRCH4O75427 AL096828.3-201ENST00000615354 462 ntBASIC15.05■□□□□ -0
LRCH4O75427 AC090386.2-201ENST00000623010 1039 ntBASIC15.05■□□□□ -0
LRCH4O75427 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LRCH4O75427 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
LRCH4O75427 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LRCH4O75427 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRCH4O75427 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms