Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ZIC3O60481 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ZIC3O60481 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
ZIC3O60481 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13□□□□□ -0.33
ZIC3O60481 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13□□□□□ -0.33
ZIC3O60481 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13□□□□□ -0.33
ZIC3O60481 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ZIC3O60481 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13□□□□□ -0.33
ZIC3O60481 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13□□□□□ -0.33
ZIC3O60481 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
ZIC3O60481 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13□□□□□ -0.33
ZIC3O60481 RNA5SP359-201ENST00000364838 113 ntBASIC13□□□□□ -0.33
ZIC3O60481 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13□□□□□ -0.33
ZIC3O60481 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 PDIA3P2-201ENST00000428073 158 ntBASIC13□□□□□ -0.33
ZIC3O60481 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13□□□□□ -0.33
ZIC3O60481 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13□□□□□ -0.33
ZIC3O60481 RN7SL530P-201ENST00000485097 298 ntBASIC13□□□□□ -0.33
ZIC3O60481 NUP210P1-202ENST00000504322 710 ntBASIC13□□□□□ -0.33
ZIC3O60481 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13□□□□□ -0.33
ZIC3O60481 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13□□□□□ -0.33
ZIC3O60481 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13□□□□□ -0.33
ZIC3O60481 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 AL022334.2-201ENST00000610000 484 ntBASIC13□□□□□ -0.33
ZIC3O60481 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 MIR6769A-201ENST00000617340 73 ntBASIC13□□□□□ -0.33
ZIC3O60481 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13□□□□□ -0.33
ZIC3O60481 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
ZIC3O60481 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13□□□□□ -0.33
ZIC3O60481 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ZIC3O60481 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
ZIC3O60481 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13□□□□□ -0.33
ZIC3O60481 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZIC3O60481 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ZIC3O60481 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.99□□□□□ -0.33
ZIC3O60481 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC3O60481 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC3O60481 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC3O60481 FRMPD2B-201ENST00000431305 1347 ntBASIC12.99□□□□□ -0.33
ZIC3O60481 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC3O60481 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.99□□□□□ -0.33
ZIC3O60481 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC3O60481 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.99□□□□□ -0.33
ZIC3O60481 AL353637.1-201ENST00000451571 732 ntBASIC12.99□□□□□ -0.33
ZIC3O60481 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.99□□□□□ -0.33
ZIC3O60481 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC3O60481 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
ZIC3O60481 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.99□□□□□ -0.33
ZIC3O60481 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.99□□□□□ -0.33
ZIC3O60481 AC020922.3-201ENST00000595064 547 ntBASIC12.99□□□□□ -0.33
ZIC3O60481 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC3O60481 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC3O60481 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.99□□□□□ -0.33
ZIC3O60481 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.99□□□□□ -0.33
ZIC3O60481 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 AC152010.1-201ENST00000415779 2006 ntBASIC12.99□□□□□ -0.33
ZIC3O60481 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.99□□□□□ -0.33
ZIC3O60481 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZIC3O60481 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms