Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ATP2A1O14983 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ATP2A1O14983 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.55■□□□□ 0.24
ATP2A1O14983 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP2A1O14983 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.55■□□□□ 0.24
ATP2A1O14983 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ATP2A1O14983 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A1O14983 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP2A1O14983 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.54■□□□□ 0.24
ATP2A1O14983 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ATP2A1O14983 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP2A1O14983 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A1O14983 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A1O14983 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A1O14983 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A1O14983 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A1O14983 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ATP2A1O14983 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A1O14983 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP2A1O14983 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.54■□□□□ 0.24
ATP2A1O14983 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.54■□□□□ 0.24
ATP2A1O14983 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.54■□□□□ 0.24
ATP2A1O14983 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP2A1O14983 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ATP2A1O14983 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
ATP2A1O14983 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.54■□□□□ 0.24
ATP2A1O14983 AC087392.5-201ENST00000612517 489 ntBASIC16.54■□□□□ 0.24
ATP2A1O14983 AC084781.1-201ENST00000613737 656 ntBASIC16.54■□□□□ 0.24
ATP2A1O14983 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.54■□□□□ 0.24
ATP2A1O14983 AC025262.2-201ENST00000623975 1056 ntBASIC16.54■□□□□ 0.24
ATP2A1O14983 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
ATP2A1O14983 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ATP2A1O14983 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.54■□□□□ 0.24
ATP2A1O14983 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A1O14983 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A1O14983 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ATP2A1O14983 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A1O14983 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A1O14983 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A1O14983 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ATP2A1O14983 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.53■□□□□ 0.24
ATP2A1O14983 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ATP2A1O14983 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A1O14983 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP2A1O14983 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP2A1O14983 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ATP2A1O14983 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP2A1O14983 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A1O14983 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.53■□□□□ 0.24
ATP2A1O14983 RPL18AP3-201ENST00000462885 528 ntBASIC16.53■□□□□ 0.24
ATP2A1O14983 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP2A1O14983 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP2A1O14983 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP2A1O14983 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP2A1O14983 BRD7P5-201ENST00000299197 1822 ntBASIC16.53■□□□□ 0.24
ATP2A1O14983 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A1O14983 AGGF1P1-201ENST00000509500 2073 ntBASIC16.53■□□□□ 0.24
ATP2A1O14983 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ATP2A1O14983 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP2A1O14983 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ATP2A1O14983 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ATP2A1O14983 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A1O14983 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.53■□□□□ 0.24
ATP2A1O14983 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ATP2A1O14983 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A1O14983 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A1O14983 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A1O14983 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.52■□□□□ 0.24
ATP2A1O14983 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.52■□□□□ 0.24
ATP2A1O14983 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.52■□□□□ 0.24
ATP2A1O14983 AC215219.1-201ENST00000400706 1817 ntBASIC16.52■□□□□ 0.24
ATP2A1O14983 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.52■□□□□ 0.24
ATP2A1O14983 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A1O14983 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A1O14983 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A1O14983 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ATP2A1O14983 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A1O14983 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A1O14983 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms