Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PDLIM1O00151 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.93□□□□□ -0.18
PDLIM1O00151 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.93□□□□□ -0.18
PDLIM1O00151 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PDLIM1O00151 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.93□□□□□ -0.18
PDLIM1O00151 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.93□□□□□ -0.18
PDLIM1O00151 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
PDLIM1O00151 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.93□□□□□ -0.18
PDLIM1O00151 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PDLIM1O00151 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
PDLIM1O00151 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PDLIM1O00151 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PDLIM1O00151 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.93□□□□□ -0.18
PDLIM1O00151 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.93□□□□□ -0.18
PDLIM1O00151 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.93□□□□□ -0.18
PDLIM1O00151 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PDLIM1O00151 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
PDLIM1O00151 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 MEX3B-202ENST00000558133 4333 ntBASIC13.93□□□□□ -0.18
PDLIM1O00151 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.93□□□□□ -0.18
PDLIM1O00151 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDLIM1O00151 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.93□□□□□ -0.18
PDLIM1O00151 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
PDLIM1O00151 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM1O00151 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.92□□□□□ -0.18
PDLIM1O00151 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC13.92□□□□□ -0.18
PDLIM1O00151 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PDLIM1O00151 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.92□□□□□ -0.18
PDLIM1O00151 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM1O00151 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM1O00151 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM1O00151 KRT8P14-201ENST00000414254 1442 ntBASIC13.92□□□□□ -0.18
PDLIM1O00151 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PDLIM1O00151 AL157996.1-201ENST00000624684 2299 ntBASIC13.92□□□□□ -0.18
PDLIM1O00151 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PDLIM1O00151 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
PDLIM1O00151 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM1O00151 AC090643.2-201ENST00000623442 2029 ntBASIC13.92□□□□□ -0.18
PDLIM1O00151 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM1O00151 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM1O00151 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.92□□□□□ -0.18
PDLIM1O00151 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PDLIM1O00151 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM1O00151 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.92□□□□□ -0.18
PDLIM1O00151 TERF1P3-201ENST00000505638 1227 ntBASIC13.92□□□□□ -0.18
PDLIM1O00151 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM1O00151 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.92□□□□□ -0.18
PDLIM1O00151 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.92□□□□□ -0.18
PDLIM1O00151 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM1O00151 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.92□□□□□ -0.18
PDLIM1O00151 LINC01115-203ENST00000606068 577 ntBASIC13.92□□□□□ -0.18
PDLIM1O00151 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.92□□□□□ -0.18
PDLIM1O00151 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
PDLIM1O00151 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.92□□□□□ -0.18
PDLIM1O00151 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PDLIM1O00151 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM1O00151 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PDLIM1O00151 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.92□□□□□ -0.18
PDLIM1O00151 HSPA8P5-201ENST00000456928 2069 ntBASIC13.92□□□□□ -0.18
PDLIM1O00151 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM1O00151 AL445209.1-201ENST00000607269 3491 ntBASIC13.92□□□□□ -0.18
PDLIM1O00151 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC13.92□□□□□ -0.18
PDLIM1O00151 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM1O00151 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM1O00151 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDLIM1O00151 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PDLIM1O00151 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.91□□□□□ -0.18
PDLIM1O00151 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PDLIM1O00151 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.91□□□□□ -0.18
PDLIM1O00151 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
PDLIM1O00151 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.91□□□□□ -0.18
PDLIM1O00151 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PDLIM1O00151 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC13.91□□□□□ -0.18
PDLIM1O00151 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.91□□□□□ -0.18
PDLIM1O00151 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PDLIM1O00151 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PDLIM1O00151 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.91□□□□□ -0.18
PDLIM1O00151 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.91□□□□□ -0.18
PDLIM1O00151 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms