Protein–RNA interactions for Protein: A6NCL1

GMNC, Geminin coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMNCA6NCL1 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GMNCA6NCL1 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
GMNCA6NCL1 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 AL592309.1-201ENST00000443127 649 ntBASIC14.55□□□□□ -0.08
GMNCA6NCL1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 AC131206.1-201ENST00000538078 1211 ntBASIC14.55□□□□□ -0.08
GMNCA6NCL1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 AC140113.2-201ENST00000604370 208 ntBASIC14.55□□□□□ -0.08
GMNCA6NCL1 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMNCA6NCL1 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
GMNCA6NCL1 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 SERBP1P3-201ENST00000459980 809 ntBASIC14.54□□□□□ -0.08
GMNCA6NCL1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 AC139712.1-201ENST00000378256 1875 ntBASIC14.54□□□□□ -0.08
GMNCA6NCL1 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 AC012531.1-201ENST00000562848 2680 ntBASIC14.54□□□□□ -0.08
GMNCA6NCL1 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GMNCA6NCL1 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
GMNCA6NCL1 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GMNCA6NCL1 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GMNCA6NCL1 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GMNCA6NCL1 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms