Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 AL603764.1-201ENST00000636452 321 ntBASIC13.19□□□□□ -0.3
TMEM129A0AVI4 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM129A0AVI4 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 NCLP1-201ENST00000445357 1963 ntBASIC13.18□□□□□ -0.3
TMEM129A0AVI4 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 AC092933.1-201ENST00000393644 945 ntBASIC13.18□□□□□ -0.3
TMEM129A0AVI4 AL139094.1-201ENST00000405549 1188 ntBASIC13.18□□□□□ -0.3
TMEM129A0AVI4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 AC119751.2-201ENST00000504529 210 ntBASIC13.18□□□□□ -0.3
TMEM129A0AVI4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 SNX29P1-201ENST00000548357 1007 ntBASIC13.18□□□□□ -0.3
TMEM129A0AVI4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 MIR4259-201ENST00000584466 101 ntBASIC13.18□□□□□ -0.3
TMEM129A0AVI4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 AL022328.1-201ENST00000610050 478 ntBASIC13.18□□□□□ -0.3
TMEM129A0AVI4 MIR6775-201ENST00000617557 69 ntBASIC13.18□□□□□ -0.3
TMEM129A0AVI4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TMEM129A0AVI4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TMEM129A0AVI4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms