Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 ABCB10P4-201ENST00000566803 2184 ntBASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 AC004448.1-201ENST00000458332 883 ntBASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DRB4X5D2U9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DRB4X5D2U9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DRB4X5D2U9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DRB4X5D2U9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DRB4X5D2U9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HLA-DRB4X5D2U9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DRB4X5D2U9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DRB4X5D2U9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HLA-DRB4X5D2U9 Z92544.1-202ENST00000571933 1220 ntBASIC16.96■□□□□ 0.31
HLA-DRB4X5D2U9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DRB4X5D2U9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.96■□□□□ 0.31
HLA-DRB4X5D2U9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HLA-DRB4X5D2U9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DRB4X5D2U9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DRB4X5D2U9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DRB4X5D2U9 DUSP8P5-201ENST00000422884 1815 ntBASIC16.96■□□□□ 0.3
HLA-DRB4X5D2U9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.96■□□□□ 0.3
HLA-DRB4X5D2U9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRB4X5D2U9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRB4X5D2U9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRB4X5D2U9 AC021242.3-201ENST00000607598 1377 ntBASIC16.95■□□□□ 0.3
HLA-DRB4X5D2U9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DRB4X5D2U9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRB4X5D2U9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.95■□□□□ 0.3
HLA-DRB4X5D2U9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.95■□□□□ 0.3
HLA-DRB4X5D2U9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.95■□□□□ 0.3
HLA-DRB4X5D2U9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRB4X5D2U9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRB4X5D2U9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRB4X5D2U9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRB4X5D2U9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRB4X5D2U9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 KRT125P-201ENST00000546827 989 ntBASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 ALDH1A3-203ENST00000557963 1670 ntBASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRB4X5D2U9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HLA-DRB4X5D2U9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HLA-DRB4X5D2U9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HLA-DRB4X5D2U9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DRB4X5D2U9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DRB4X5D2U9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DRB4X5D2U9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DRB4X5D2U9 AC009299.2-201ENST00000482477 511 ntBASIC16.93■□□□□ 0.3
HLA-DRB4X5D2U9 AL451085.2-201ENST00000605085 799 ntBASIC16.93■□□□□ 0.3
HLA-DRB4X5D2U9 SNX5-217ENST00000606557 1087 ntBASIC16.93■□□□□ 0.3
HLA-DRB4X5D2U9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HLA-DRB4X5D2U9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DRB4X5D2U9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HLA-DRB4X5D2U9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DRB4X5D2U9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DRB4X5D2U9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-DRB4X5D2U9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DRB4X5D2U9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DRB4X5D2U9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.92■□□□□ 0.3
HLA-DRB4X5D2U9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DRB4X5D2U9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-DRB4X5D2U9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DRB4X5D2U9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DRB4X5D2U9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DRB4X5D2U9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DRB4X5D2U9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DRB4X5D2U9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-DRB4X5D2U9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DRB4X5D2U9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DRB4X5D2U9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DRB4X5D2U9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DRB4X5D2U9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DRB4X5D2U9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DRB4X5D2U9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DRB4X5D2U9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms