Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NR2E3Q9Y5X4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.38■■□□□ 1.65
NR2E3Q9Y5X4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.38■■□□□ 1.65
NR2E3Q9Y5X4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NR2E3Q9Y5X4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.38■■□□□ 1.65
NR2E3Q9Y5X4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.38■■□□□ 1.65
NR2E3Q9Y5X4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.38■■□□□ 1.65
NR2E3Q9Y5X4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
NR2E3Q9Y5X4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NR2E3Q9Y5X4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.38■■□□□ 1.65
NR2E3Q9Y5X4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.37■■□□□ 1.65
NR2E3Q9Y5X4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC25.37■■□□□ 1.65
NR2E3Q9Y5X4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NR2E3Q9Y5X4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.37■■□□□ 1.65
NR2E3Q9Y5X4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NR2E3Q9Y5X4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.37■■□□□ 1.65
NR2E3Q9Y5X4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
NR2E3Q9Y5X4 AC104771.1-201ENST00000603335 964 ntBASIC25.37■■□□□ 1.65
NR2E3Q9Y5X4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.37■■□□□ 1.65
NR2E3Q9Y5X4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.37■■□□□ 1.65
NR2E3Q9Y5X4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NR2E3Q9Y5X4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NR2E3Q9Y5X4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NR2E3Q9Y5X4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.36■■□□□ 1.65
NR2E3Q9Y5X4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
NR2E3Q9Y5X4 AC012414.1-201ENST00000556676 535 ntBASIC25.36■■□□□ 1.65
NR2E3Q9Y5X4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.36■■□□□ 1.65
NR2E3Q9Y5X4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
NR2E3Q9Y5X4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NR2E3Q9Y5X4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
NR2E3Q9Y5X4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.35■■□□□ 1.65
NR2E3Q9Y5X4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
NR2E3Q9Y5X4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
NR2E3Q9Y5X4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NR2E3Q9Y5X4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
NR2E3Q9Y5X4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NR2E3Q9Y5X4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.35■■□□□ 1.65
NR2E3Q9Y5X4 C17orf82-201ENST00000623772 1530 ntBASIC25.35■■□□□ 1.65
NR2E3Q9Y5X4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.35■■□□□ 1.65
NR2E3Q9Y5X4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NR2E3Q9Y5X4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NR2E3Q9Y5X4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NR2E3Q9Y5X4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.34■■□□□ 1.65
NR2E3Q9Y5X4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NR2E3Q9Y5X4 MIR572-201ENST00000384983 95 ntBASIC25.34■■□□□ 1.65
NR2E3Q9Y5X4 AC006455.2-201ENST00000429931 906 ntBASIC25.34■■□□□ 1.65
NR2E3Q9Y5X4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NR2E3Q9Y5X4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NR2E3Q9Y5X4 AC009086.3-201ENST00000623486 1008 ntBASIC25.34■■□□□ 1.65
NR2E3Q9Y5X4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC25.34■■□□□ 1.65
NR2E3Q9Y5X4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
NR2E3Q9Y5X4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.33■■□□□ 1.65
NR2E3Q9Y5X4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
NR2E3Q9Y5X4 LINC02228-203ENST00000641970 1355 ntBASIC25.33■■□□□ 1.65
NR2E3Q9Y5X4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
NR2E3Q9Y5X4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
NR2E3Q9Y5X4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.33■■□□□ 1.65
NR2E3Q9Y5X4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.33■■□□□ 1.65
NR2E3Q9Y5X4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.33■■□□□ 1.65
NR2E3Q9Y5X4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.33■■□□□ 1.65
NR2E3Q9Y5X4 TERF1P2-201ENST00000583350 1212 ntBASIC25.33■■□□□ 1.65
NR2E3Q9Y5X4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.33■■□□□ 1.65
NR2E3Q9Y5X4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.33■■□□□ 1.65
NR2E3Q9Y5X4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
NR2E3Q9Y5X4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.32■■□□□ 1.64
NR2E3Q9Y5X4 AL355802.2-201ENST00000402069 882 ntBASIC25.32■■□□□ 1.64
NR2E3Q9Y5X4 RAP2CP1-201ENST00000605103 478 ntBASIC25.32■■□□□ 1.64
NR2E3Q9Y5X4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
NR2E3Q9Y5X4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
NR2E3Q9Y5X4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NR2E3Q9Y5X4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NR2E3Q9Y5X4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NR2E3Q9Y5X4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.31■■□□□ 1.64
NR2E3Q9Y5X4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NR2E3Q9Y5X4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NR2E3Q9Y5X4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.31■■□□□ 1.64
NR2E3Q9Y5X4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC25.31■■□□□ 1.64
NR2E3Q9Y5X4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
NR2E3Q9Y5X4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
NR2E3Q9Y5X4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NR2E3Q9Y5X4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NR2E3Q9Y5X4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
NR2E3Q9Y5X4 CDCA4P2-201ENST00000441182 718 ntBASIC25.3■■□□□ 1.64
NR2E3Q9Y5X4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
NR2E3Q9Y5X4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.3■■□□□ 1.64
NR2E3Q9Y5X4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NR2E3Q9Y5X4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.3■■□□□ 1.64
NR2E3Q9Y5X4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
NR2E3Q9Y5X4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
NR2E3Q9Y5X4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NR2E3Q9Y5X4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
NR2E3Q9Y5X4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
NR2E3Q9Y5X4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.29■■□□□ 1.64
NR2E3Q9Y5X4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.29■■□□□ 1.64
NR2E3Q9Y5X4 AC073111.5-205ENST00000641717 521 ntBASIC25.29■■□□□ 1.64
NR2E3Q9Y5X4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.29■■□□□ 1.64
NR2E3Q9Y5X4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.29■■□□□ 1.64
NR2E3Q9Y5X4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NR2E3Q9Y5X4 AC016769.1-201ENST00000409132 1010 ntBASIC25.28■■□□□ 1.64
NR2E3Q9Y5X4 AC026185.1-201ENST00000445748 174 ntBASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms