Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
CDC42BPBQ9Y5S2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC34.87■■■■□ 3.17
CDC42BPBQ9Y5S2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC34.87■■■■□ 3.17
CDC42BPBQ9Y5S2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC34.87■■■■□ 3.17
CDC42BPBQ9Y5S2 TSPY26P-201ENST00000476365 1326 ntBASIC34.86■■■■□ 3.17
CDC42BPBQ9Y5S2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC34.86■■■■□ 3.17
CDC42BPBQ9Y5S2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC34.86■■■■□ 3.17
CDC42BPBQ9Y5S2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC34.86■■■■□ 3.17
CDC42BPBQ9Y5S2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC34.86■■■■□ 3.17
CDC42BPBQ9Y5S2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
CDC42BPBQ9Y5S2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC34.85■■■■□ 3.17
CDC42BPBQ9Y5S2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC34.85■■■■□ 3.17
CDC42BPBQ9Y5S2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
CDC42BPBQ9Y5S2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CDC42BPBQ9Y5S2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC34.85■■■■□ 3.17
CDC42BPBQ9Y5S2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CDC42BPBQ9Y5S2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CDC42BPBQ9Y5S2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC34.84■■■■□ 3.17
CDC42BPBQ9Y5S2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC34.84■■■■□ 3.17
CDC42BPBQ9Y5S2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC34.84■■■■□ 3.17
CDC42BPBQ9Y5S2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC34.84■■■■□ 3.17
CDC42BPBQ9Y5S2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC34.84■■■■□ 3.17
CDC42BPBQ9Y5S2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CDC42BPBQ9Y5S2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC34.84■■■■□ 3.17
CDC42BPBQ9Y5S2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC34.84■■■■□ 3.17
CDC42BPBQ9Y5S2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CDC42BPBQ9Y5S2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CDC42BPBQ9Y5S2 AC022517.1-201ENST00000592429 346 ntBASIC34.84■■■■□ 3.17
CDC42BPBQ9Y5S2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
CDC42BPBQ9Y5S2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CDC42BPBQ9Y5S2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC34.83■■■■□ 3.17
CDC42BPBQ9Y5S2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC34.83■■■■□ 3.17
CDC42BPBQ9Y5S2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC34.83■■■■□ 3.17
CDC42BPBQ9Y5S2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
CDC42BPBQ9Y5S2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC34.82■■■■□ 3.17
CDC42BPBQ9Y5S2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
CDC42BPBQ9Y5S2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
CDC42BPBQ9Y5S2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
CDC42BPBQ9Y5S2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC34.82■■■■□ 3.16
CDC42BPBQ9Y5S2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC34.82■■■■□ 3.16
CDC42BPBQ9Y5S2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
CDC42BPBQ9Y5S2 AC126544.1-201ENST00000580842 1059 ntBASIC34.82■■■■□ 3.16
CDC42BPBQ9Y5S2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC34.82■■■■□ 3.16
CDC42BPBQ9Y5S2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC34.81■■■■□ 3.16
CDC42BPBQ9Y5S2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC34.81■■■■□ 3.16
CDC42BPBQ9Y5S2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CDC42BPBQ9Y5S2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC34.81■■■■□ 3.16
CDC42BPBQ9Y5S2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC34.81■■■■□ 3.16
CDC42BPBQ9Y5S2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.16
CDC42BPBQ9Y5S2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC34.81■■■■□ 3.16
CDC42BPBQ9Y5S2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC34.81■■■■□ 3.16
CDC42BPBQ9Y5S2 IGHV3-19-201ENST00000521488 291 ntBASIC34.81■■■■□ 3.16
CDC42BPBQ9Y5S2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CDC42BPBQ9Y5S2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC34.8■■■■□ 3.16
CDC42BPBQ9Y5S2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CDC42BPBQ9Y5S2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC34.8■■■■□ 3.16
CDC42BPBQ9Y5S2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CDC42BPBQ9Y5S2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CDC42BPBQ9Y5S2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC34.78■■■■□ 3.16
CDC42BPBQ9Y5S2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC34.78■■■■□ 3.16
CDC42BPBQ9Y5S2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC34.78■■■■□ 3.16
CDC42BPBQ9Y5S2 pRNA.6-201ENST00000610482 90 ntBASIC34.78■■■■□ 3.16
CDC42BPBQ9Y5S2 pRNA.5-201ENST00000612139 90 ntBASIC34.78■■■■□ 3.16
CDC42BPBQ9Y5S2 pRNA.11-201ENST00000618423 90 ntBASIC34.78■■■■□ 3.16
CDC42BPBQ9Y5S2 pRNA.13-201ENST00000619112 90 ntBASIC34.78■■■■□ 3.16
CDC42BPBQ9Y5S2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC34.78■■■■□ 3.16
CDC42BPBQ9Y5S2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC34.78■■■■□ 3.16
CDC42BPBQ9Y5S2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CDC42BPBQ9Y5S2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC34.78■■■■□ 3.16
CDC42BPBQ9Y5S2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
CDC42BPBQ9Y5S2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC34.78■■■■□ 3.16
CDC42BPBQ9Y5S2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CDC42BPBQ9Y5S2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC34.77■■■■□ 3.16
CDC42BPBQ9Y5S2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
CDC42BPBQ9Y5S2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC34.77■■■■□ 3.16
CDC42BPBQ9Y5S2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
CDC42BPBQ9Y5S2 AL137784.2-201ENST00000607332 1000 ntBASIC34.77■■■■□ 3.16
CDC42BPBQ9Y5S2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC34.77■■■■□ 3.16
CDC42BPBQ9Y5S2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC34.77■■■■□ 3.16
CDC42BPBQ9Y5S2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
CDC42BPBQ9Y5S2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
CDC42BPBQ9Y5S2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CDC42BPBQ9Y5S2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CDC42BPBQ9Y5S2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CDC42BPBQ9Y5S2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC34.75■■■■□ 3.15
CDC42BPBQ9Y5S2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
CDC42BPBQ9Y5S2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CDC42BPBQ9Y5S2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC34.75■■■■□ 3.15
CDC42BPBQ9Y5S2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC34.75■■■■□ 3.15
CDC42BPBQ9Y5S2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC34.74■■■■□ 3.15
CDC42BPBQ9Y5S2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
CDC42BPBQ9Y5S2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC34.74■■■■□ 3.15
CDC42BPBQ9Y5S2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC34.74■■■■□ 3.15
CDC42BPBQ9Y5S2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC34.74■■■■□ 3.15
CDC42BPBQ9Y5S2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
CDC42BPBQ9Y5S2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC34.74■■■■□ 3.15
CDC42BPBQ9Y5S2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC34.74■■■■□ 3.15
CDC42BPBQ9Y5S2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC34.73■■■■□ 3.15
CDC42BPBQ9Y5S2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC34.73■■■■□ 3.15
CDC42BPBQ9Y5S2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC34.73■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms