Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 DUX4L6-201ENST00000626483 1275 ntBASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 DUX4L1-201ENST00000627662 1275 ntBASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 DUX4L8-201ENST00000629013 1275 ntBASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 DUX4L3-201ENST00000630187 1275 ntBASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 DUX4L7-201ENST00000630678 1275 ntBASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 DUX4L5-201ENST00000630834 1275 ntBASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 C17orf82-201ENST00000623772 1530 ntBASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHA11Q9Y5I1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA11Q9Y5I1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA11Q9Y5I1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA11Q9Y5I1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHA11Q9Y5I1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHA11Q9Y5I1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA11Q9Y5I1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA11Q9Y5I1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.77■■□□□ 1.56
PCDHA11Q9Y5I1 AC004911.1-201ENST00000416316 871 ntBASIC24.77■■□□□ 1.56
PCDHA11Q9Y5I1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.77■■□□□ 1.56
PCDHA11Q9Y5I1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA11Q9Y5I1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.77■■□□□ 1.56
PCDHA11Q9Y5I1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA11Q9Y5I1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA11Q9Y5I1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA11Q9Y5I1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHA11Q9Y5I1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
PCDHA11Q9Y5I1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHA11Q9Y5I1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHA11Q9Y5I1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.76■■□□□ 1.55
PCDHA11Q9Y5I1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDHA11Q9Y5I1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
PCDHA11Q9Y5I1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA11Q9Y5I1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA11Q9Y5I1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA11Q9Y5I1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA11Q9Y5I1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDHA11Q9Y5I1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
PCDHA11Q9Y5I1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA11Q9Y5I1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDHA11Q9Y5I1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA11Q9Y5I1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA11Q9Y5I1 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.75■■□□□ 1.55
PCDHA11Q9Y5I1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
PCDHA11Q9Y5I1 AC006455.2-201ENST00000429931 906 ntBASIC24.75■■□□□ 1.55
PCDHA11Q9Y5I1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDHA11Q9Y5I1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDHA11Q9Y5I1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
PCDHA11Q9Y5I1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.74■■□□□ 1.55
PCDHA11Q9Y5I1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDHA11Q9Y5I1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA11Q9Y5I1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
PCDHA11Q9Y5I1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.74■■□□□ 1.55
PCDHA11Q9Y5I1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDHA11Q9Y5I1 MIR3181-201ENST00000578512 73 ntBASIC24.74■■□□□ 1.55
PCDHA11Q9Y5I1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.74■■□□□ 1.55
PCDHA11Q9Y5I1 AC131274.2-201ENST00000580697 1507 ntBASIC24.74■■□□□ 1.55
PCDHA11Q9Y5I1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA11Q9Y5I1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
PCDHA11Q9Y5I1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA11Q9Y5I1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHA11Q9Y5I1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.73■■□□□ 1.55
PCDHA11Q9Y5I1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA11Q9Y5I1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
PCDHA11Q9Y5I1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA11Q9Y5I1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
PCDHA11Q9Y5I1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA11Q9Y5I1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDHA11Q9Y5I1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA11Q9Y5I1 AC123595.1-201ENST00000440769 1046 ntBASIC24.72■■□□□ 1.55
PCDHA11Q9Y5I1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA11Q9Y5I1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.72■■□□□ 1.55
PCDHA11Q9Y5I1 AC126544.1-201ENST00000580842 1059 ntBASIC24.72■■□□□ 1.55
PCDHA11Q9Y5I1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
PCDHA11Q9Y5I1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA11Q9Y5I1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA11Q9Y5I1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA11Q9Y5I1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA11Q9Y5I1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA11Q9Y5I1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDHA11Q9Y5I1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA11Q9Y5I1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
PCDHA11Q9Y5I1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDHA11Q9Y5I1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.71■■□□□ 1.55
PCDHA11Q9Y5I1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA11Q9Y5I1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDHA11Q9Y5I1 AC009086.3-201ENST00000623486 1008 ntBASIC24.71■■□□□ 1.55
PCDHA11Q9Y5I1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDHA11Q9Y5I1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHA11Q9Y5I1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
PCDHA11Q9Y5I1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA11Q9Y5I1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA11Q9Y5I1 AC027612.3-201ENST00000413684 1047 ntBASIC24.7■■□□□ 1.54
PCDHA11Q9Y5I1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHA11Q9Y5I1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
PCDHA11Q9Y5I1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
PCDHA11Q9Y5I1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.7■■□□□ 1.54
PCDHA11Q9Y5I1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms