Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA2Q9Y5H1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGA2Q9Y5H1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHGA2Q9Y5H1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGA2Q9Y5H1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHGA2Q9Y5H1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.03■■□□□ 1.28
PCDHGA2Q9Y5H1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHGA2Q9Y5H1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHGA2Q9Y5H1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGA2Q9Y5H1 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.02■■□□□ 1.28
PCDHGA2Q9Y5H1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGA2Q9Y5H1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PCDHGA2Q9Y5H1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHGA2Q9Y5H1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHGA2Q9Y5H1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGA2Q9Y5H1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHGA2Q9Y5H1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGA2Q9Y5H1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGA2Q9Y5H1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PCDHGA2Q9Y5H1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGA2Q9Y5H1 AC009102.2-201ENST00000606772 1639 ntBASIC23.01■■□□□ 1.27
PCDHGA2Q9Y5H1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGA2Q9Y5H1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PCDHGA2Q9Y5H1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHGA2Q9Y5H1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGA2Q9Y5H1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGA2Q9Y5H1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGA2Q9Y5H1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PCDHGA2Q9Y5H1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGA2Q9Y5H1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PCDHGA2Q9Y5H1 ERN1-208ENST00000606895 2068 ntBASIC23■■□□□ 1.27
PCDHGA2Q9Y5H1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGA2Q9Y5H1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGA2Q9Y5H1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
PCDHGA2Q9Y5H1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
PCDHGA2Q9Y5H1 AC123595.1-201ENST00000440769 1046 ntBASIC22.99■■□□□ 1.27
PCDHGA2Q9Y5H1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGA2Q9Y5H1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHGA2Q9Y5H1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
PCDHGA2Q9Y5H1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHGA2Q9Y5H1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
PCDHGA2Q9Y5H1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDHGA2Q9Y5H1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
PCDHGA2Q9Y5H1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
PCDHGA2Q9Y5H1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.98■■□□□ 1.27
PCDHGA2Q9Y5H1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHGA2Q9Y5H1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGA2Q9Y5H1 C17orf82-201ENST00000623772 1530 ntBASIC22.98■■□□□ 1.27
PCDHGA2Q9Y5H1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA2Q9Y5H1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA2Q9Y5H1 AC027612.3-201ENST00000413684 1047 ntBASIC22.97■■□□□ 1.27
PCDHGA2Q9Y5H1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.97■■□□□ 1.27
PCDHGA2Q9Y5H1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA2Q9Y5H1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
PCDHGA2Q9Y5H1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.97■■□□□ 1.27
PCDHGA2Q9Y5H1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA2Q9Y5H1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA2Q9Y5H1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.97■■□□□ 1.27
PCDHGA2Q9Y5H1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA2Q9Y5H1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA2Q9Y5H1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGA2Q9Y5H1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGA2Q9Y5H1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGA2Q9Y5H1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGA2Q9Y5H1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.96■■□□□ 1.27
PCDHGA2Q9Y5H1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.96■■□□□ 1.27
PCDHGA2Q9Y5H1 AC126544.1-201ENST00000580842 1059 ntBASIC22.96■■□□□ 1.27
PCDHGA2Q9Y5H1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHGA2Q9Y5H1 AL358852.1-201ENST00000623174 1268 ntBASIC22.96■■□□□ 1.27
PCDHGA2Q9Y5H1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGA2Q9Y5H1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDHGA2Q9Y5H1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGA2Q9Y5H1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.95■■□□□ 1.26
PCDHGA2Q9Y5H1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.95■■□□□ 1.26
PCDHGA2Q9Y5H1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGA2Q9Y5H1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.95■■□□□ 1.26
PCDHGA2Q9Y5H1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGA2Q9Y5H1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.95■■□□□ 1.26
PCDHGA2Q9Y5H1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.95■■□□□ 1.26
PCDHGA2Q9Y5H1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.95■■□□□ 1.26
PCDHGA2Q9Y5H1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.95■■□□□ 1.26
PCDHGA2Q9Y5H1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
PCDHGA2Q9Y5H1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.95■■□□□ 1.26
PCDHGA2Q9Y5H1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGA2Q9Y5H1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA2Q9Y5H1 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.94■■□□□ 1.26
PCDHGA2Q9Y5H1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA2Q9Y5H1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.94■■□□□ 1.26
PCDHGA2Q9Y5H1 MIR3181-201ENST00000578512 73 ntBASIC22.94■■□□□ 1.26
PCDHGA2Q9Y5H1 AC020928.2-201ENST00000588717 2197 ntBASIC22.94■■□□□ 1.26
PCDHGA2Q9Y5H1 AC096887.2-201ENST00000623443 1957 ntBASIC22.94■■□□□ 1.26
PCDHGA2Q9Y5H1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA2Q9Y5H1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
PCDHGA2Q9Y5H1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA2Q9Y5H1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
PCDHGA2Q9Y5H1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGA2Q9Y5H1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.93■■□□□ 1.26
PCDHGA2Q9Y5H1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGA2Q9Y5H1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms