Protein–RNA interactions for Protein: Q9Y4L5

RNF115, E3 ubiquitin-protein ligase RNF115, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF115Q9Y4L5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF115Q9Y4L5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF115Q9Y4L5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF115Q9Y4L5 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF115Q9Y4L5 EDA-201ENST00000338901 1233 ntBASIC19.7■□□□□ 0.74
RNF115Q9Y4L5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF115Q9Y4L5 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF115Q9Y4L5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF115Q9Y4L5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF115Q9Y4L5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF115Q9Y4L5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF115Q9Y4L5 AC022211.4-201ENST00000625094 2161 ntBASIC19.7■□□□□ 0.74
RNF115Q9Y4L5 SYT6-210ENST00000641643 1587 ntBASIC19.7■□□□□ 0.74
RNF115Q9Y4L5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF115Q9Y4L5 AL139125.2-201ENST00000623134 1869 ntBASIC19.69■□□□□ 0.74
RNF115Q9Y4L5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF115Q9Y4L5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF115Q9Y4L5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RNF115Q9Y4L5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF115Q9Y4L5 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF115Q9Y4L5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF115Q9Y4L5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RNF115Q9Y4L5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF115Q9Y4L5 AC138932.3-201ENST00000567634 1902 ntBASIC19.68■□□□□ 0.74
RNF115Q9Y4L5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RNF115Q9Y4L5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF115Q9Y4L5 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF115Q9Y4L5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF115Q9Y4L5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
RNF115Q9Y4L5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF115Q9Y4L5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF115Q9Y4L5 AL355001.2-201ENST00000620617 1191 ntBASIC19.68■□□□□ 0.74
RNF115Q9Y4L5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF115Q9Y4L5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF115Q9Y4L5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF115Q9Y4L5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF115Q9Y4L5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF115Q9Y4L5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF115Q9Y4L5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF115Q9Y4L5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF115Q9Y4L5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF115Q9Y4L5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF115Q9Y4L5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RNF115Q9Y4L5 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF115Q9Y4L5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF115Q9Y4L5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF115Q9Y4L5 AC009102.2-201ENST00000606772 1639 ntBASIC19.66■□□□□ 0.74
RNF115Q9Y4L5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF115Q9Y4L5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF115Q9Y4L5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF115Q9Y4L5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF115Q9Y4L5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF115Q9Y4L5 AL031432.3-201ENST00000607698 485 ntBASIC19.66■□□□□ 0.74
RNF115Q9Y4L5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF115Q9Y4L5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF115Q9Y4L5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF115Q9Y4L5 HLA-L-211ENST00000482052 1765 ntBASIC19.65■□□□□ 0.74
RNF115Q9Y4L5 SUDS3P1-201ENST00000505831 966 ntBASIC19.65■□□□□ 0.74
RNF115Q9Y4L5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF115Q9Y4L5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF115Q9Y4L5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF115Q9Y4L5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF115Q9Y4L5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF115Q9Y4L5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF115Q9Y4L5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF115Q9Y4L5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF115Q9Y4L5 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF115Q9Y4L5 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF115Q9Y4L5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.64■□□□□ 0.74
RNF115Q9Y4L5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF115Q9Y4L5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
RNF115Q9Y4L5 AC099791.2-201ENST00000605725 427 ntBASIC19.64■□□□□ 0.73
RNF115Q9Y4L5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF115Q9Y4L5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF115Q9Y4L5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF115Q9Y4L5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF115Q9Y4L5 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RNF115Q9Y4L5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.64■□□□□ 0.73
RNF115Q9Y4L5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF115Q9Y4L5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF115Q9Y4L5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
RNF115Q9Y4L5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RNF115Q9Y4L5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF115Q9Y4L5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF115Q9Y4L5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF115Q9Y4L5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF115Q9Y4L5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF115Q9Y4L5 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.63■□□□□ 0.73
RNF115Q9Y4L5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF115Q9Y4L5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF115Q9Y4L5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF115Q9Y4L5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF115Q9Y4L5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF115Q9Y4L5 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF115Q9Y4L5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF115Q9Y4L5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF115Q9Y4L5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF115Q9Y4L5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF115Q9Y4L5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF115Q9Y4L5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms