Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 RP9P-202ENST00000450133 1212 ntBASIC20.12■□□□□ 0.81
SF3B6Q9Y3B4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.12■□□□□ 0.81
SF3B6Q9Y3B4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.12■□□□□ 0.81
SF3B6Q9Y3B4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
SF3B6Q9Y3B4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SF3B6Q9Y3B4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SF3B6Q9Y3B4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SF3B6Q9Y3B4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SF3B6Q9Y3B4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SF3B6Q9Y3B4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SF3B6Q9Y3B4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.11■□□□□ 0.81
SF3B6Q9Y3B4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SF3B6Q9Y3B4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SF3B6Q9Y3B4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SF3B6Q9Y3B4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SF3B6Q9Y3B4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SF3B6Q9Y3B4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.11■□□□□ 0.81
SF3B6Q9Y3B4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.11■□□□□ 0.81
SF3B6Q9Y3B4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SF3B6Q9Y3B4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SF3B6Q9Y3B4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.1■□□□□ 0.81
SF3B6Q9Y3B4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SF3B6Q9Y3B4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.1■□□□□ 0.81
SF3B6Q9Y3B4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.1■□□□□ 0.81
SF3B6Q9Y3B4 AC242852.2-201ENST00000615738 1807 ntBASIC20.1■□□□□ 0.81
SF3B6Q9Y3B4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SF3B6Q9Y3B4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SF3B6Q9Y3B4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.1■□□□□ 0.81
SF3B6Q9Y3B4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.09■□□□□ 0.81
SF3B6Q9Y3B4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.09■□□□□ 0.81
SF3B6Q9Y3B4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SF3B6Q9Y3B4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SF3B6Q9Y3B4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.09■□□□□ 0.81
SF3B6Q9Y3B4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SF3B6Q9Y3B4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SF3B6Q9Y3B4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SF3B6Q9Y3B4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SF3B6Q9Y3B4 AC093536.1-201ENST00000569153 554 ntBASIC20.09■□□□□ 0.81
SF3B6Q9Y3B4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SF3B6Q9Y3B4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SF3B6Q9Y3B4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SF3B6Q9Y3B4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.08■□□□□ 0.81
SF3B6Q9Y3B4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SF3B6Q9Y3B4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SF3B6Q9Y3B4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SF3B6Q9Y3B4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.08■□□□□ 0.81
SF3B6Q9Y3B4 KRT18P10-201ENST00000388836 1287 ntBASIC20.08■□□□□ 0.81
SF3B6Q9Y3B4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SF3B6Q9Y3B4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.08■□□□□ 0.81
SF3B6Q9Y3B4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.08■□□□□ 0.81
SF3B6Q9Y3B4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.07■□□□□ 0.8
SF3B6Q9Y3B4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SF3B6Q9Y3B4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SF3B6Q9Y3B4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SF3B6Q9Y3B4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SF3B6Q9Y3B4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SF3B6Q9Y3B4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SF3B6Q9Y3B4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SF3B6Q9Y3B4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.07■□□□□ 0.8
SF3B6Q9Y3B4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SF3B6Q9Y3B4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SF3B6Q9Y3B4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SF3B6Q9Y3B4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SF3B6Q9Y3B4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SF3B6Q9Y3B4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SF3B6Q9Y3B4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.06■□□□□ 0.8
SF3B6Q9Y3B4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SF3B6Q9Y3B4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SF3B6Q9Y3B4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.06■□□□□ 0.8
SF3B6Q9Y3B4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.06■□□□□ 0.8
SF3B6Q9Y3B4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.06■□□□□ 0.8
SF3B6Q9Y3B4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SF3B6Q9Y3B4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.06■□□□□ 0.8
SF3B6Q9Y3B4 AC007029.1-201ENST00000604183 313 ntBASIC20.06■□□□□ 0.8
SF3B6Q9Y3B4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
SF3B6Q9Y3B4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.05■□□□□ 0.8
SF3B6Q9Y3B4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.05■□□□□ 0.8
SF3B6Q9Y3B4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SF3B6Q9Y3B4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
SF3B6Q9Y3B4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.05■□□□□ 0.8
SF3B6Q9Y3B4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SF3B6Q9Y3B4 ESRRAP2-201ENST00000418437 1549 ntBASIC20.05■□□□□ 0.8
SF3B6Q9Y3B4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.05■□□□□ 0.8
SF3B6Q9Y3B4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SF3B6Q9Y3B4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SF3B6Q9Y3B4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.04■□□□□ 0.8
SF3B6Q9Y3B4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SF3B6Q9Y3B4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SF3B6Q9Y3B4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SF3B6Q9Y3B4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SF3B6Q9Y3B4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.04■□□□□ 0.8
SF3B6Q9Y3B4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SF3B6Q9Y3B4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SF3B6Q9Y3B4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.04■□□□□ 0.8
SF3B6Q9Y3B4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.04■□□□□ 0.8
SF3B6Q9Y3B4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SF3B6Q9Y3B4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SF3B6Q9Y3B4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SF3B6Q9Y3B4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SF3B6Q9Y3B4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms