Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LSM2Q9Y333 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LSM2Q9Y333 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.22■□□□□ 0.83
LSM2Q9Y333 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM2Q9Y333 MIR3648-2-201ENST00000581792 180 ntBASIC20.22■□□□□ 0.83
LSM2Q9Y333 MIR3648-1-201ENST00000615959 180 ntBASIC20.22■□□□□ 0.83
LSM2Q9Y333 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM2Q9Y333 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM2Q9Y333 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM2Q9Y333 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM2Q9Y333 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.21■□□□□ 0.83
LSM2Q9Y333 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LSM2Q9Y333 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.21■□□□□ 0.83
LSM2Q9Y333 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.21■□□□□ 0.83
LSM2Q9Y333 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.21■□□□□ 0.83
LSM2Q9Y333 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSM2Q9Y333 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSM2Q9Y333 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LSM2Q9Y333 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSM2Q9Y333 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LSM2Q9Y333 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSM2Q9Y333 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSM2Q9Y333 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.21■□□□□ 0.83
LSM2Q9Y333 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.21■□□□□ 0.83
LSM2Q9Y333 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
LSM2Q9Y333 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
LSM2Q9Y333 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.2■□□□□ 0.82
LSM2Q9Y333 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LSM2Q9Y333 AL137060.1-201ENST00000618151 2648 ntBASIC20.2■□□□□ 0.82
LSM2Q9Y333 AC090877.2-201ENST00000558441 1738 ntBASIC20.2■□□□□ 0.82
LSM2Q9Y333 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.2■□□□□ 0.82
LSM2Q9Y333 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LSM2Q9Y333 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSM2Q9Y333 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LSM2Q9Y333 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.2■□□□□ 0.82
LSM2Q9Y333 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LSM2Q9Y333 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSM2Q9Y333 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSM2Q9Y333 RPS2P35-201ENST00000443417 897 ntBASIC20.19■□□□□ 0.82
LSM2Q9Y333 ECEL1P2-201ENST00000461596 1295 ntBASIC20.19■□□□□ 0.82
LSM2Q9Y333 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
LSM2Q9Y333 RAP2CP1-202ENST00000605179 643 ntBASIC20.19■□□□□ 0.82
LSM2Q9Y333 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LSM2Q9Y333 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSM2Q9Y333 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
LSM2Q9Y333 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSM2Q9Y333 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSM2Q9Y333 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LSM2Q9Y333 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
LSM2Q9Y333 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSM2Q9Y333 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSM2Q9Y333 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
LSM2Q9Y333 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.18■□□□□ 0.82
LSM2Q9Y333 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.18■□□□□ 0.82
LSM2Q9Y333 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSM2Q9Y333 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LSM2Q9Y333 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSM2Q9Y333 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM2Q9Y333 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM2Q9Y333 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LSM2Q9Y333 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM2Q9Y333 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM2Q9Y333 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM2Q9Y333 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM2Q9Y333 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM2Q9Y333 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LSM2Q9Y333 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LSM2Q9Y333 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.17■□□□□ 0.82
LSM2Q9Y333 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.17■□□□□ 0.82
LSM2Q9Y333 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LSM2Q9Y333 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM2Q9Y333 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LSM2Q9Y333 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM2Q9Y333 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM2Q9Y333 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LSM2Q9Y333 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.16■□□□□ 0.82
LSM2Q9Y333 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LSM2Q9Y333 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.16■□□□□ 0.82
LSM2Q9Y333 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LSM2Q9Y333 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LSM2Q9Y333 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LSM2Q9Y333 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LSM2Q9Y333 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
LSM2Q9Y333 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.16■□□□□ 0.82
LSM2Q9Y333 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM2Q9Y333 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM2Q9Y333 AC026202.3-201ENST00000600805 1127 ntBASIC20.15■□□□□ 0.82
LSM2Q9Y333 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.15■□□□□ 0.82
LSM2Q9Y333 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM2Q9Y333 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.15■□□□□ 0.82
LSM2Q9Y333 AC139530.1-201ENST00000575312 1977 ntBASIC20.15■□□□□ 0.82
LSM2Q9Y333 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LSM2Q9Y333 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
LSM2Q9Y333 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LSM2Q9Y333 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
LSM2Q9Y333 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
LSM2Q9Y333 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LSM2Q9Y333 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.14■□□□□ 0.81
LSM2Q9Y333 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.14■□□□□ 0.81
LSM2Q9Y333 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms