Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.37■□□□□ 0.37
NOTCH3Q9UM47 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.37■□□□□ 0.37
NOTCH3Q9UM47 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.37■□□□□ 0.37
NOTCH3Q9UM47 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH3Q9UM47 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.37■□□□□ 0.37
NOTCH3Q9UM47 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.37■□□□□ 0.37
NOTCH3Q9UM47 AC092803.2-201ENST00000564287 1899 ntBASIC17.37■□□□□ 0.37
NOTCH3Q9UM47 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH3Q9UM47 AC006455.2-201ENST00000429931 906 ntBASIC17.37■□□□□ 0.37
NOTCH3Q9UM47 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.37■□□□□ 0.37
NOTCH3Q9UM47 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.37■□□□□ 0.37
NOTCH3Q9UM47 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH3Q9UM47 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH3Q9UM47 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH3Q9UM47 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NOTCH3Q9UM47 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOTCH3Q9UM47 AC022517.1-201ENST00000592429 346 ntBASIC17.36■□□□□ 0.37
NOTCH3Q9UM47 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.36■□□□□ 0.37
NOTCH3Q9UM47 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NOTCH3Q9UM47 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOTCH3Q9UM47 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NOTCH3Q9UM47 AC131274.2-201ENST00000580697 1507 ntBASIC17.36■□□□□ 0.37
NOTCH3Q9UM47 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOTCH3Q9UM47 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.36■□□□□ 0.37
NOTCH3Q9UM47 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOTCH3Q9UM47 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.36■□□□□ 0.37
NOTCH3Q9UM47 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NOTCH3Q9UM47 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NOTCH3Q9UM47 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NOTCH3Q9UM47 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NOTCH3Q9UM47 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NOTCH3Q9UM47 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NOTCH3Q9UM47 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NOTCH3Q9UM47 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NOTCH3Q9UM47 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NOTCH3Q9UM47 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NOTCH3Q9UM47 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NOTCH3Q9UM47 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NOTCH3Q9UM47 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NOTCH3Q9UM47 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NOTCH3Q9UM47 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.34■□□□□ 0.37
NOTCH3Q9UM47 AC135731.1-201ENST00000569415 2548 ntBASIC17.34■□□□□ 0.37
NOTCH3Q9UM47 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
NOTCH3Q9UM47 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NOTCH3Q9UM47 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
NOTCH3Q9UM47 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NOTCH3Q9UM47 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NOTCH3Q9UM47 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NOTCH3Q9UM47 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NOTCH3Q9UM47 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NOTCH3Q9UM47 AC233992.3-201ENST00000607491 485 ntBASIC17.33■□□□□ 0.37
NOTCH3Q9UM47 IKBKGP1-201ENST00000612193 1073 ntBASIC17.33■□□□□ 0.37
NOTCH3Q9UM47 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NOTCH3Q9UM47 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NOTCH3Q9UM47 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NOTCH3Q9UM47 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.33■□□□□ 0.36
NOTCH3Q9UM47 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.33■□□□□ 0.36
NOTCH3Q9UM47 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NOTCH3Q9UM47 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NOTCH3Q9UM47 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NOTCH3Q9UM47 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NOTCH3Q9UM47 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NOTCH3Q9UM47 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NOTCH3Q9UM47 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 AC099791.1-201ENST00000416440 715 ntBASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 RARRES2P11-201ENST00000635158 484 ntBASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH3Q9UM47 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH3Q9UM47 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.31■□□□□ 0.36
NOTCH3Q9UM47 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH3Q9UM47 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.31■□□□□ 0.36
NOTCH3Q9UM47 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH3Q9UM47 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
NOTCH3Q9UM47 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH3Q9UM47 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.31■□□□□ 0.36
NOTCH3Q9UM47 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.3■□□□□ 0.36
NOTCH3Q9UM47 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH3Q9UM47 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
NOTCH3Q9UM47 AC241377.3-202ENST00000626088 1088 ntBASIC17.3■□□□□ 0.36
NOTCH3Q9UM47 AC241585.3-202ENST00000628937 1088 ntBASIC17.3■□□□□ 0.36
NOTCH3Q9UM47 AC245100.8-202ENST00000629247 1058 ntBASIC17.3■□□□□ 0.36
NOTCH3Q9UM47 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.3■□□□□ 0.36
NOTCH3Q9UM47 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms