Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC29.33■■■□□ 2.29
CCNL1Q9UK58 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC29.33■■■□□ 2.29
CCNL1Q9UK58 CCDC92B-201ENST00000575506 885 ntBASIC29.33■■■□□ 2.29
CCNL1Q9UK58 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CCNL1Q9UK58 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC29.33■■■□□ 2.29
CCNL1Q9UK58 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCNL1Q9UK58 GTSE1-AS1-202ENST00000623117 1518 ntBASIC29.33■■■□□ 2.29
CCNL1Q9UK58 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC29.33■■■□□ 2.29
CCNL1Q9UK58 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
CCNL1Q9UK58 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCNL1Q9UK58 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.31■■■□□ 2.28
CCNL1Q9UK58 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCNL1Q9UK58 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCNL1Q9UK58 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCNL1Q9UK58 AC012414.1-201ENST00000556676 535 ntBASIC29.31■■■□□ 2.28
CCNL1Q9UK58 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
CCNL1Q9UK58 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
CCNL1Q9UK58 MIR572-201ENST00000384983 95 ntBASIC29.3■■■□□ 2.28
CCNL1Q9UK58 IGHV3-19-201ENST00000521488 291 ntBASIC29.3■■■□□ 2.28
CCNL1Q9UK58 NTF6G-201ENST00000591094 616 ntBASIC29.3■■■□□ 2.28
CCNL1Q9UK58 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
CCNL1Q9UK58 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CCNL1Q9UK58 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC29.3■■■□□ 2.28
CCNL1Q9UK58 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
CCNL1Q9UK58 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CCNL1Q9UK58 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
CCNL1Q9UK58 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCNL1Q9UK58 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC29.29■■■□□ 2.28
CCNL1Q9UK58 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCNL1Q9UK58 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCNL1Q9UK58 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCNL1Q9UK58 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCNL1Q9UK58 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCNL1Q9UK58 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC29.28■■■□□ 2.28
CCNL1Q9UK58 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.28■■■□□ 2.28
CCNL1Q9UK58 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCNL1Q9UK58 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC29.28■■■□□ 2.28
CCNL1Q9UK58 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CCNL1Q9UK58 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCNL1Q9UK58 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC29.28■■■□□ 2.28
CCNL1Q9UK58 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCNL1Q9UK58 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC29.27■■■□□ 2.28
CCNL1Q9UK58 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC29.27■■■□□ 2.28
CCNL1Q9UK58 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC29.27■■■□□ 2.28
CCNL1Q9UK58 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC29.27■■■□□ 2.28
CCNL1Q9UK58 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC29.27■■■□□ 2.28
CCNL1Q9UK58 AL354811.1-201ENST00000610286 706 ntBASIC29.27■■■□□ 2.28
CCNL1Q9UK58 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC29.27■■■□□ 2.28
CCNL1Q9UK58 PKM-203ENST00000389093 2279 ntTSL 5 BASIC29.27■■■□□ 2.28
CCNL1Q9UK58 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CCNL1Q9UK58 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
CCNL1Q9UK58 HLA-L-209ENST00000420110 1011 ntBASIC29.26■■■□□ 2.27
CCNL1Q9UK58 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC29.26■■■□□ 2.27
CCNL1Q9UK58 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CCNL1Q9UK58 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
CCNL1Q9UK58 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC29.25■■■□□ 2.27
CCNL1Q9UK58 KRT18P14-201ENST00000534205 1250 ntBASIC29.25■■■□□ 2.27
CCNL1Q9UK58 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CCNL1Q9UK58 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
CCNL1Q9UK58 SLC6A10P-202ENST00000431994 2058 ntBASIC29.25■■■□□ 2.27
CCNL1Q9UK58 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CCNL1Q9UK58 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC29.25■■■□□ 2.27
CCNL1Q9UK58 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC29.24■■■□□ 2.27
CCNL1Q9UK58 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CCNL1Q9UK58 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CCNL1Q9UK58 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
CCNL1Q9UK58 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC29.24■■■□□ 2.27
CCNL1Q9UK58 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC29.24■■■□□ 2.27
CCNL1Q9UK58 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC29.24■■■□□ 2.27
CCNL1Q9UK58 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CCNL1Q9UK58 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC29.24■■■□□ 2.27
CCNL1Q9UK58 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC29.24■■■□□ 2.27
CCNL1Q9UK58 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CCNL1Q9UK58 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
CCNL1Q9UK58 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.23■■■□□ 2.27
CCNL1Q9UK58 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC29.23■■■□□ 2.27
CCNL1Q9UK58 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CCNL1Q9UK58 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC29.23■■■□□ 2.27
CCNL1Q9UK58 MIR6089-201ENST00000616698 64 ntBASIC29.23■■■□□ 2.27
CCNL1Q9UK58 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CCNL1Q9UK58 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
CCNL1Q9UK58 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC29.22■■■□□ 2.27
CCNL1Q9UK58 ME3-201ENST00000323418 1068 ntTSL 5 BASIC29.22■■■□□ 2.27
CCNL1Q9UK58 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC29.22■■■□□ 2.27
CCNL1Q9UK58 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC29.22■■■□□ 2.27
CCNL1Q9UK58 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
CCNL1Q9UK58 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC29.21■■■□□ 2.27
CCNL1Q9UK58 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC29.21■■■□□ 2.27
CCNL1Q9UK58 USF2-207ENST00000595068 1612 ntTSL 5 BASIC29.21■■■□□ 2.27
CCNL1Q9UK58 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CCNL1Q9UK58 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC29.21■■■□□ 2.27
CCNL1Q9UK58 TERF1P2-201ENST00000583350 1212 ntBASIC29.21■■■□□ 2.27
CCNL1Q9UK58 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
CCNL1Q9UK58 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.2■■■□□ 2.27
CCNL1Q9UK58 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
CCNL1Q9UK58 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC29.2■■■□□ 2.26
CCNL1Q9UK58 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CCNL1Q9UK58 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CCNL1Q9UK58 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CCNL1Q9UK58 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms