Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SDHAF3Q9NRP4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.75■□□□□ 0.91
SDHAF3Q9NRP4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SDHAF3Q9NRP4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.75■□□□□ 0.91
SDHAF3Q9NRP4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SDHAF3Q9NRP4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.75■□□□□ 0.91
SDHAF3Q9NRP4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.75■□□□□ 0.91
SDHAF3Q9NRP4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SDHAF3Q9NRP4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SDHAF3Q9NRP4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SDHAF3Q9NRP4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SDHAF3Q9NRP4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SDHAF3Q9NRP4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SDHAF3Q9NRP4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SDHAF3Q9NRP4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SDHAF3Q9NRP4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SDHAF3Q9NRP4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SDHAF3Q9NRP4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SDHAF3Q9NRP4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SDHAF3Q9NRP4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.74■□□□□ 0.91
SDHAF3Q9NRP4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SDHAF3Q9NRP4 AC093323.1-202ENST00000635031 2045 ntBASIC20.73■□□□□ 0.91
SDHAF3Q9NRP4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SDHAF3Q9NRP4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SDHAF3Q9NRP4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SDHAF3Q9NRP4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SDHAF3Q9NRP4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SDHAF3Q9NRP4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SDHAF3Q9NRP4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SDHAF3Q9NRP4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SDHAF3Q9NRP4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SDHAF3Q9NRP4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SDHAF3Q9NRP4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.72■□□□□ 0.91
SDHAF3Q9NRP4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.72■□□□□ 0.91
SDHAF3Q9NRP4 MIR3621-201ENST00000580529 85 ntBASIC20.72■□□□□ 0.91
SDHAF3Q9NRP4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.72■□□□□ 0.91
SDHAF3Q9NRP4 AL117332.1-201ENST00000622628 974 ntBASIC20.72■□□□□ 0.91
SDHAF3Q9NRP4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.72■□□□□ 0.91
SDHAF3Q9NRP4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SDHAF3Q9NRP4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.71■□□□□ 0.91
SDHAF3Q9NRP4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SDHAF3Q9NRP4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SDHAF3Q9NRP4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.71■□□□□ 0.91
SDHAF3Q9NRP4 AC131212.1-201ENST00000613771 668 ntBASIC20.71■□□□□ 0.91
SDHAF3Q9NRP4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.71■□□□□ 0.91
SDHAF3Q9NRP4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SDHAF3Q9NRP4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SDHAF3Q9NRP4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SDHAF3Q9NRP4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SDHAF3Q9NRP4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SDHAF3Q9NRP4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SDHAF3Q9NRP4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.7■□□□□ 0.9
SDHAF3Q9NRP4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SDHAF3Q9NRP4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SDHAF3Q9NRP4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.7■□□□□ 0.9
SDHAF3Q9NRP4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SDHAF3Q9NRP4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SDHAF3Q9NRP4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SDHAF3Q9NRP4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDHAF3Q9NRP4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SDHAF3Q9NRP4 ABCB10P4-201ENST00000566803 2184 ntBASIC20.69■□□□□ 0.9
SDHAF3Q9NRP4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
SDHAF3Q9NRP4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDHAF3Q9NRP4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.69■□□□□ 0.9
SDHAF3Q9NRP4 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.69■□□□□ 0.9
SDHAF3Q9NRP4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.69■□□□□ 0.9
SDHAF3Q9NRP4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDHAF3Q9NRP4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.69■□□□□ 0.9
SDHAF3Q9NRP4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.69■□□□□ 0.9
SDHAF3Q9NRP4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDHAF3Q9NRP4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDHAF3Q9NRP4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDHAF3Q9NRP4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SDHAF3Q9NRP4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SDHAF3Q9NRP4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SDHAF3Q9NRP4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SDHAF3Q9NRP4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SDHAF3Q9NRP4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SDHAF3Q9NRP4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.68■□□□□ 0.9
SDHAF3Q9NRP4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SDHAF3Q9NRP4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SDHAF3Q9NRP4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SDHAF3Q9NRP4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDHAF3Q9NRP4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.67■□□□□ 0.9
SDHAF3Q9NRP4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.67■□□□□ 0.9
SDHAF3Q9NRP4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.67■□□□□ 0.9
SDHAF3Q9NRP4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.67■□□□□ 0.9
SDHAF3Q9NRP4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.67■□□□□ 0.9
SDHAF3Q9NRP4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.67■□□□□ 0.9
SDHAF3Q9NRP4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDHAF3Q9NRP4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDHAF3Q9NRP4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDHAF3Q9NRP4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
SDHAF3Q9NRP4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SDHAF3Q9NRP4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.66■□□□□ 0.9
SDHAF3Q9NRP4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.66■□□□□ 0.9
SDHAF3Q9NRP4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SDHAF3Q9NRP4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.66■□□□□ 0.9
SDHAF3Q9NRP4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.66■□□□□ 0.9
SDHAF3Q9NRP4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms