Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ATP13A1Q9HD20 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.26■■□□□ 1.31
ATP13A1Q9HD20 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
ATP13A1Q9HD20 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.26■■□□□ 1.31
ATP13A1Q9HD20 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ATP13A1Q9HD20 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP13A1Q9HD20 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
ATP13A1Q9HD20 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.25■■□□□ 1.31
ATP13A1Q9HD20 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
ATP13A1Q9HD20 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP13A1Q9HD20 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ATP13A1Q9HD20 AC131281.2-201ENST00000520478 145 ntBASIC23.25■■□□□ 1.31
ATP13A1Q9HD20 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.25■■□□□ 1.31
ATP13A1Q9HD20 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATP13A1Q9HD20 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.25■■□□□ 1.31
ATP13A1Q9HD20 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ATP13A1Q9HD20 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ATP13A1Q9HD20 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
ATP13A1Q9HD20 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP13A1Q9HD20 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ATP13A1Q9HD20 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP13A1Q9HD20 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.24■■□□□ 1.31
ATP13A1Q9HD20 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ATP13A1Q9HD20 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ATP13A1Q9HD20 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ATP13A1Q9HD20 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP13A1Q9HD20 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ATP13A1Q9HD20 AC008406.3-201ENST00000620001 1374 ntBASIC23.24■■□□□ 1.31
ATP13A1Q9HD20 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP13A1Q9HD20 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ATP13A1Q9HD20 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP13A1Q9HD20 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATP13A1Q9HD20 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
ATP13A1Q9HD20 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP13A1Q9HD20 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.23■■□□□ 1.31
ATP13A1Q9HD20 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.23■■□□□ 1.31
ATP13A1Q9HD20 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ATP13A1Q9HD20 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP13A1Q9HD20 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATP13A1Q9HD20 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ATP13A1Q9HD20 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP13A1Q9HD20 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP13A1Q9HD20 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP13A1Q9HD20 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
ATP13A1Q9HD20 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ATP13A1Q9HD20 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.22■■□□□ 1.31
ATP13A1Q9HD20 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP13A1Q9HD20 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.22■■□□□ 1.31
ATP13A1Q9HD20 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ATP13A1Q9HD20 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.22■■□□□ 1.31
ATP13A1Q9HD20 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP13A1Q9HD20 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP13A1Q9HD20 ABCB10P4-201ENST00000566803 2184 ntBASIC23.21■■□□□ 1.31
ATP13A1Q9HD20 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP13A1Q9HD20 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP13A1Q9HD20 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
ATP13A1Q9HD20 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP13A1Q9HD20 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATP13A1Q9HD20 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.21■■□□□ 1.31
ATP13A1Q9HD20 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP13A1Q9HD20 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP13A1Q9HD20 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.21■■□□□ 1.31
ATP13A1Q9HD20 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATP13A1Q9HD20 AL512631.2-201ENST00000604634 923 ntBASIC23.21■■□□□ 1.31
ATP13A1Q9HD20 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
ATP13A1Q9HD20 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.2■■□□□ 1.3
ATP13A1Q9HD20 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP13A1Q9HD20 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
ATP13A1Q9HD20 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP13A1Q9HD20 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP13A1Q9HD20 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP13A1Q9HD20 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP13A1Q9HD20 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.2■■□□□ 1.3
ATP13A1Q9HD20 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP13A1Q9HD20 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP13A1Q9HD20 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP13A1Q9HD20 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP13A1Q9HD20 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP13A1Q9HD20 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP13A1Q9HD20 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
ATP13A1Q9HD20 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP13A1Q9HD20 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP13A1Q9HD20 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.19■■□□□ 1.3
ATP13A1Q9HD20 MIR4466-201ENST00000606121 54 ntBASIC23.19■■□□□ 1.3
ATP13A1Q9HD20 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
ATP13A1Q9HD20 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP13A1Q9HD20 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ATP13A1Q9HD20 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP13A1Q9HD20 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP13A1Q9HD20 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP13A1Q9HD20 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP13A1Q9HD20 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP13A1Q9HD20 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP13A1Q9HD20 AL136116.3-201ENST00000402907 1138 ntBASIC23.17■■□□□ 1.3
ATP13A1Q9HD20 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.17■■□□□ 1.3
ATP13A1Q9HD20 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP13A1Q9HD20 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.16■■□□□ 1.3
ATP13A1Q9HD20 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.16■■□□□ 1.3
ATP13A1Q9HD20 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP13A1Q9HD20 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms