Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MSL2Q9HCI7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MSL2Q9HCI7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.43■□□□□ 0.7
MSL2Q9HCI7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.43■□□□□ 0.7
MSL2Q9HCI7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.43■□□□□ 0.7
MSL2Q9HCI7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.43■□□□□ 0.7
MSL2Q9HCI7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.43■□□□□ 0.7
MSL2Q9HCI7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSL2Q9HCI7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MSL2Q9HCI7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.42■□□□□ 0.7
MSL2Q9HCI7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MSL2Q9HCI7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSL2Q9HCI7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.42■□□□□ 0.7
MSL2Q9HCI7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.42■□□□□ 0.7
MSL2Q9HCI7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSL2Q9HCI7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.42■□□□□ 0.7
MSL2Q9HCI7 AL117332.1-201ENST00000622628 974 ntBASIC19.42■□□□□ 0.7
MSL2Q9HCI7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
MSL2Q9HCI7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSL2Q9HCI7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSL2Q9HCI7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MSL2Q9HCI7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
MSL2Q9HCI7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MSL2Q9HCI7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSL2Q9HCI7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.41■□□□□ 0.7
MSL2Q9HCI7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MSL2Q9HCI7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.4■□□□□ 0.7
MSL2Q9HCI7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MSL2Q9HCI7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MSL2Q9HCI7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MSL2Q9HCI7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MSL2Q9HCI7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.4■□□□□ 0.7
MSL2Q9HCI7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.4■□□□□ 0.7
MSL2Q9HCI7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MSL2Q9HCI7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
MSL2Q9HCI7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.4■□□□□ 0.7
MSL2Q9HCI7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MSL2Q9HCI7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MSL2Q9HCI7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.39■□□□□ 0.69
MSL2Q9HCI7 AL356740.2-201ENST00000601559 647 ntBASIC19.39■□□□□ 0.69
MSL2Q9HCI7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MSL2Q9HCI7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MSL2Q9HCI7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MSL2Q9HCI7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
MSL2Q9HCI7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MSL2Q9HCI7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MSL2Q9HCI7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MSL2Q9HCI7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MSL2Q9HCI7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.38■□□□□ 0.69
MSL2Q9HCI7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
MSL2Q9HCI7 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.38■□□□□ 0.69
MSL2Q9HCI7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.38■□□□□ 0.69
MSL2Q9HCI7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.38■□□□□ 0.69
MSL2Q9HCI7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.37■□□□□ 0.69
MSL2Q9HCI7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSL2Q9HCI7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MSL2Q9HCI7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSL2Q9HCI7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.37■□□□□ 0.69
MSL2Q9HCI7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.37■□□□□ 0.69
MSL2Q9HCI7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.37■□□□□ 0.69
MSL2Q9HCI7 MIR3621-201ENST00000580529 85 ntBASIC19.37■□□□□ 0.69
MSL2Q9HCI7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSL2Q9HCI7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSL2Q9HCI7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MSL2Q9HCI7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSL2Q9HCI7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSL2Q9HCI7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
MSL2Q9HCI7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSL2Q9HCI7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSL2Q9HCI7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MSL2Q9HCI7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.36■□□□□ 0.69
MSL2Q9HCI7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.36■□□□□ 0.69
MSL2Q9HCI7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.36■□□□□ 0.69
MSL2Q9HCI7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.36■□□□□ 0.69
MSL2Q9HCI7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
MSL2Q9HCI7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSL2Q9HCI7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.35■□□□□ 0.69
MSL2Q9HCI7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
MSL2Q9HCI7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSL2Q9HCI7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.35■□□□□ 0.69
MSL2Q9HCI7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
MSL2Q9HCI7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.35■□□□□ 0.69
MSL2Q9HCI7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.35■□□□□ 0.69
MSL2Q9HCI7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSL2Q9HCI7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.35■□□□□ 0.69
MSL2Q9HCI7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSL2Q9HCI7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.34■□□□□ 0.69
MSL2Q9HCI7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
MSL2Q9HCI7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
MSL2Q9HCI7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms