Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
VPS33BQ9H267 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
VPS33BQ9H267 MIR572-201ENST00000384983 95 ntBASIC27.73■■■□□ 2.03
VPS33BQ9H267 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
VPS33BQ9H267 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC27.73■■■□□ 2.03
VPS33BQ9H267 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
VPS33BQ9H267 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27.73■■■□□ 2.03
VPS33BQ9H267 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
VPS33BQ9H267 AC141586.4-201ENST00000624558 1573 ntBASIC27.73■■■□□ 2.03
VPS33BQ9H267 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
VPS33BQ9H267 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC27.72■■■□□ 2.03
VPS33BQ9H267 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.72■■■□□ 2.03
VPS33BQ9H267 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.72■■■□□ 2.03
VPS33BQ9H267 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
VPS33BQ9H267 IGHV3-19-201ENST00000521488 291 ntBASIC27.72■■■□□ 2.03
VPS33BQ9H267 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC27.72■■■□□ 2.03
VPS33BQ9H267 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC27.72■■■□□ 2.03
VPS33BQ9H267 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC27.72■■■□□ 2.03
VPS33BQ9H267 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC27.71■■■□□ 2.03
VPS33BQ9H267 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
VPS33BQ9H267 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC27.71■■■□□ 2.03
VPS33BQ9H267 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC27.71■■■□□ 2.03
VPS33BQ9H267 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
VPS33BQ9H267 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.71■■■□□ 2.03
VPS33BQ9H267 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
VPS33BQ9H267 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC27.71■■■□□ 2.03
VPS33BQ9H267 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC27.71■■■□□ 2.03
VPS33BQ9H267 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
VPS33BQ9H267 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
VPS33BQ9H267 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
VPS33BQ9H267 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC27.7■■■□□ 2.02
VPS33BQ9H267 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC27.7■■■□□ 2.02
VPS33BQ9H267 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC27.7■■■□□ 2.02
VPS33BQ9H267 AL354811.1-201ENST00000610286 706 ntBASIC27.7■■■□□ 2.02
VPS33BQ9H267 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC27.7■■■□□ 2.02
VPS33BQ9H267 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
VPS33BQ9H267 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
VPS33BQ9H267 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
VPS33BQ9H267 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
VPS33BQ9H267 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
VPS33BQ9H267 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
VPS33BQ9H267 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
VPS33BQ9H267 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
VPS33BQ9H267 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
VPS33BQ9H267 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
VPS33BQ9H267 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
VPS33BQ9H267 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
VPS33BQ9H267 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC27.68■■■□□ 2.02
VPS33BQ9H267 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
VPS33BQ9H267 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC27.68■■■□□ 2.02
VPS33BQ9H267 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC27.68■■■□□ 2.02
VPS33BQ9H267 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC27.68■■■□□ 2.02
VPS33BQ9H267 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
VPS33BQ9H267 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC27.68■■■□□ 2.02
VPS33BQ9H267 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC27.68■■■□□ 2.02
VPS33BQ9H267 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
VPS33BQ9H267 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC27.67■■■□□ 2.02
VPS33BQ9H267 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
VPS33BQ9H267 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
VPS33BQ9H267 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
VPS33BQ9H267 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
VPS33BQ9H267 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC27.67■■■□□ 2.02
VPS33BQ9H267 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC27.67■■■□□ 2.02
VPS33BQ9H267 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC27.67■■■□□ 2.02
VPS33BQ9H267 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
VPS33BQ9H267 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC27.67■■■□□ 2.02
VPS33BQ9H267 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
VPS33BQ9H267 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC27.67■■■□□ 2.02
VPS33BQ9H267 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC27.67■■■□□ 2.02
VPS33BQ9H267 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.67■■■□□ 2.02
VPS33BQ9H267 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
VPS33BQ9H267 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
VPS33BQ9H267 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
VPS33BQ9H267 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
VPS33BQ9H267 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
VPS33BQ9H267 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
VPS33BQ9H267 AC012414.1-201ENST00000556676 535 ntBASIC27.66■■■□□ 2.02
VPS33BQ9H267 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
VPS33BQ9H267 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
VPS33BQ9H267 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
VPS33BQ9H267 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
VPS33BQ9H267 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC27.65■■■□□ 2.02
VPS33BQ9H267 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC27.65■■■□□ 2.02
VPS33BQ9H267 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
VPS33BQ9H267 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.65■■■□□ 2.02
VPS33BQ9H267 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC27.64■■■□□ 2.02
VPS33BQ9H267 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
VPS33BQ9H267 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
VPS33BQ9H267 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.02
VPS33BQ9H267 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
VPS33BQ9H267 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
VPS33BQ9H267 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
VPS33BQ9H267 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
VPS33BQ9H267 USF2-207ENST00000595068 1612 ntTSL 5 BASIC27.63■■■□□ 2.01
VPS33BQ9H267 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
VPS33BQ9H267 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC27.63■■■□□ 2.01
VPS33BQ9H267 ID1-201ENST00000376105 1233 ntBASIC27.63■■■□□ 2.01
VPS33BQ9H267 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
VPS33BQ9H267 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
VPS33BQ9H267 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC27.63■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms