Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MED28Q9H204 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MED28Q9H204 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MED28Q9H204 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MED28Q9H204 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MED28Q9H204 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.33■□□□□ 0.69
MED28Q9H204 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.33■□□□□ 0.69
MED28Q9H204 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
MED28Q9H204 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
MED28Q9H204 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MED28Q9H204 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
MED28Q9H204 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.33■□□□□ 0.68
MED28Q9H204 AC073130.3-201ENST00000624389 2278 ntBASIC19.33■□□□□ 0.68
MED28Q9H204 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
MED28Q9H204 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MED28Q9H204 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MED28Q9H204 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MED28Q9H204 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MED28Q9H204 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
MED28Q9H204 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
MED28Q9H204 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
MED28Q9H204 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.32■□□□□ 0.68
MED28Q9H204 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.32■□□□□ 0.68
MED28Q9H204 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MED28Q9H204 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MED28Q9H204 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
MED28Q9H204 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MED28Q9H204 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MED28Q9H204 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MED28Q9H204 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MED28Q9H204 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.31■□□□□ 0.68
MED28Q9H204 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.31■□□□□ 0.68
MED28Q9H204 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MED28Q9H204 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MED28Q9H204 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.31■□□□□ 0.68
MED28Q9H204 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MED28Q9H204 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MED28Q9H204 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.31■□□□□ 0.68
MED28Q9H204 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.3■□□□□ 0.68
MED28Q9H204 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MED28Q9H204 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
MED28Q9H204 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
MED28Q9H204 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.3■□□□□ 0.68
MED28Q9H204 RARRES2P7-201ENST00000567349 469 ntBASIC19.3■□□□□ 0.68
MED28Q9H204 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MED28Q9H204 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MED28Q9H204 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MED28Q9H204 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MED28Q9H204 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MED28Q9H204 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
MED28Q9H204 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.29■□□□□ 0.68
MED28Q9H204 AL359504.2-201ENST00000605506 1601 ntBASIC19.29■□□□□ 0.68
MED28Q9H204 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
MED28Q9H204 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MED28Q9H204 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MED28Q9H204 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MED28Q9H204 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
MED28Q9H204 CAHM-201ENST00000604200 896 ntBASIC19.29■□□□□ 0.68
MED28Q9H204 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MED28Q9H204 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MED28Q9H204 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.28■□□□□ 0.68
MED28Q9H204 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.28■□□□□ 0.68
MED28Q9H204 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.28■□□□□ 0.68
MED28Q9H204 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MED28Q9H204 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
MED28Q9H204 AC092667.1-201ENST00000434301 2586 ntBASIC19.28■□□□□ 0.68
MED28Q9H204 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MED28Q9H204 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
MED28Q9H204 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MED28Q9H204 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.27■□□□□ 0.68
MED28Q9H204 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MED28Q9H204 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MED28Q9H204 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MED28Q9H204 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.27■□□□□ 0.68
MED28Q9H204 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
MED28Q9H204 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MED28Q9H204 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.27■□□□□ 0.68
MED28Q9H204 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
MED28Q9H204 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
MED28Q9H204 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MED28Q9H204 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MED28Q9H204 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MED28Q9H204 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
MED28Q9H204 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MED28Q9H204 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MED28Q9H204 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MED28Q9H204 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MED28Q9H204 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MED28Q9H204 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MED28Q9H204 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MED28Q9H204 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.26■□□□□ 0.67
MED28Q9H204 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MED28Q9H204 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.26■□□□□ 0.67
MED28Q9H204 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
MED28Q9H204 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MED28Q9H204 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MED28Q9H204 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MED28Q9H204 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MED28Q9H204 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MED28Q9H204 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms