Protein–RNA interactions for Protein: Q9BQG1

SYT3, Synaptotagmin-3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYT3Q9BQG1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYT3Q9BQG1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SYT3Q9BQG1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SYT3Q9BQG1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SYT3Q9BQG1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYT3Q9BQG1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYT3Q9BQG1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.71■□□□□ 0.75
SYT3Q9BQG1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYT3Q9BQG1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.71■□□□□ 0.75
SYT3Q9BQG1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYT3Q9BQG1 LINC00543-201ENST00000567234 1845 ntBASIC19.71■□□□□ 0.75
SYT3Q9BQG1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYT3Q9BQG1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYT3Q9BQG1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYT3Q9BQG1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SYT3Q9BQG1 AC141586.4-201ENST00000624558 1573 ntBASIC19.7■□□□□ 0.74
SYT3Q9BQG1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYT3Q9BQG1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYT3Q9BQG1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.7■□□□□ 0.74
SYT3Q9BQG1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.7■□□□□ 0.74
SYT3Q9BQG1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.7■□□□□ 0.74
SYT3Q9BQG1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYT3Q9BQG1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYT3Q9BQG1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYT3Q9BQG1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYT3Q9BQG1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYT3Q9BQG1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.7■□□□□ 0.74
SYT3Q9BQG1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYT3Q9BQG1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.69■□□□□ 0.74
SYT3Q9BQG1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SYT3Q9BQG1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.69■□□□□ 0.74
SYT3Q9BQG1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.69■□□□□ 0.74
SYT3Q9BQG1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
SYT3Q9BQG1 MIR6722-201ENST00000617286 78 ntBASIC19.69■□□□□ 0.74
SYT3Q9BQG1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SYT3Q9BQG1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYT3Q9BQG1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYT3Q9BQG1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SYT3Q9BQG1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYT3Q9BQG1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYT3Q9BQG1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYT3Q9BQG1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SYT3Q9BQG1 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.68■□□□□ 0.74
SYT3Q9BQG1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYT3Q9BQG1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.68■□□□□ 0.74
SYT3Q9BQG1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.68■□□□□ 0.74
SYT3Q9BQG1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.68■□□□□ 0.74
SYT3Q9BQG1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYT3Q9BQG1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SYT3Q9BQG1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.67■□□□□ 0.74
SYT3Q9BQG1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYT3Q9BQG1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYT3Q9BQG1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYT3Q9BQG1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.67■□□□□ 0.74
SYT3Q9BQG1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYT3Q9BQG1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.67■□□□□ 0.74
SYT3Q9BQG1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.67■□□□□ 0.74
SYT3Q9BQG1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYT3Q9BQG1 AL117332.1-201ENST00000622628 974 ntBASIC19.67■□□□□ 0.74
SYT3Q9BQG1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYT3Q9BQG1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SYT3Q9BQG1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYT3Q9BQG1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYT3Q9BQG1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYT3Q9BQG1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SYT3Q9BQG1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.66■□□□□ 0.74
SYT3Q9BQG1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.66■□□□□ 0.74
SYT3Q9BQG1 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.66■□□□□ 0.74
SYT3Q9BQG1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYT3Q9BQG1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYT3Q9BQG1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYT3Q9BQG1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYT3Q9BQG1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.65■□□□□ 0.74
SYT3Q9BQG1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYT3Q9BQG1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYT3Q9BQG1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYT3Q9BQG1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.65■□□□□ 0.74
SYT3Q9BQG1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.65■□□□□ 0.74
SYT3Q9BQG1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.65■□□□□ 0.74
SYT3Q9BQG1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.65■□□□□ 0.74
SYT3Q9BQG1 AL356740.2-201ENST00000601559 647 ntBASIC19.65■□□□□ 0.74
SYT3Q9BQG1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.65■□□□□ 0.74
SYT3Q9BQG1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYT3Q9BQG1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYT3Q9BQG1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SYT3Q9BQG1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
SYT3Q9BQG1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
SYT3Q9BQG1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SYT3Q9BQG1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYT3Q9BQG1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYT3Q9BQG1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.64■□□□□ 0.73
SYT3Q9BQG1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.64■□□□□ 0.73
SYT3Q9BQG1 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.64■□□□□ 0.73
SYT3Q9BQG1 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.64■□□□□ 0.73
SYT3Q9BQG1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYT3Q9BQG1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYT3Q9BQG1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.64■□□□□ 0.73
SYT3Q9BQG1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.64■□□□□ 0.73
SYT3Q9BQG1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.64■□□□□ 0.73
SYT3Q9BQG1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms