Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.45■□□□□ 0.54
ZNF48Q96MX3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF48Q96MX3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF48Q96MX3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ZNF48Q96MX3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF48Q96MX3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF48Q96MX3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
ZNF48Q96MX3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF48Q96MX3 AC105265.2-201ENST00000467189 838 ntBASIC18.44■□□□□ 0.54
ZNF48Q96MX3 AP001330.3-201ENST00000520123 633 ntBASIC18.44■□□□□ 0.54
ZNF48Q96MX3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF48Q96MX3 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF48Q96MX3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF48Q96MX3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF48Q96MX3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF48Q96MX3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF48Q96MX3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF48Q96MX3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF48Q96MX3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF48Q96MX3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.43■□□□□ 0.54
ZNF48Q96MX3 AL022069.1-201ENST00000568025 1636 ntBASIC18.43■□□□□ 0.54
ZNF48Q96MX3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF48Q96MX3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF48Q96MX3 SERBP1P1-201ENST00000396021 1160 ntBASIC18.43■□□□□ 0.54
ZNF48Q96MX3 MIR939-201ENST00000401314 82 ntBASIC18.43■□□□□ 0.54
ZNF48Q96MX3 AC026271.2-201ENST00000428091 497 ntBASIC18.43■□□□□ 0.54
ZNF48Q96MX3 MIR4767-201ENST00000582827 78 ntBASIC18.43■□□□□ 0.54
ZNF48Q96MX3 AC099791.2-201ENST00000605725 427 ntBASIC18.43■□□□□ 0.54
ZNF48Q96MX3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF48Q96MX3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF48Q96MX3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF48Q96MX3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ZNF48Q96MX3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.42■□□□□ 0.54
ZNF48Q96MX3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF48Q96MX3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.42■□□□□ 0.54
ZNF48Q96MX3 AC009102.2-201ENST00000606772 1639 ntBASIC18.42■□□□□ 0.54
ZNF48Q96MX3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.42■□□□□ 0.54
ZNF48Q96MX3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ZNF48Q96MX3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF48Q96MX3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF48Q96MX3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF48Q96MX3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF48Q96MX3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF48Q96MX3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF48Q96MX3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ZNF48Q96MX3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ZNF48Q96MX3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF48Q96MX3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.41■□□□□ 0.54
ZNF48Q96MX3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.41■□□□□ 0.54
ZNF48Q96MX3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.41■□□□□ 0.54
ZNF48Q96MX3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ZNF48Q96MX3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.41■□□□□ 0.54
ZNF48Q96MX3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF48Q96MX3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF48Q96MX3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF48Q96MX3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ZNF48Q96MX3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF48Q96MX3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF48Q96MX3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF48Q96MX3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF48Q96MX3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.4■□□□□ 0.54
ZNF48Q96MX3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.4■□□□□ 0.54
ZNF48Q96MX3 AC092171.4-201ENST00000609130 632 ntBASIC18.4■□□□□ 0.54
ZNF48Q96MX3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.4■□□□□ 0.54
ZNF48Q96MX3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF48Q96MX3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF48Q96MX3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF48Q96MX3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF48Q96MX3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
ZNF48Q96MX3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF48Q96MX3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF48Q96MX3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF48Q96MX3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF48Q96MX3 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.39■□□□□ 0.53
ZNF48Q96MX3 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.39■□□□□ 0.53
ZNF48Q96MX3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ZNF48Q96MX3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.39■□□□□ 0.53
ZNF48Q96MX3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.39■□□□□ 0.53
ZNF48Q96MX3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ZNF48Q96MX3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF48Q96MX3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ZNF48Q96MX3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF48Q96MX3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF48Q96MX3 AC141586.4-201ENST00000624558 1573 ntBASIC18.38■□□□□ 0.53
ZNF48Q96MX3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.38■□□□□ 0.53
ZNF48Q96MX3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF48Q96MX3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF48Q96MX3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF48Q96MX3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF48Q96MX3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF48Q96MX3 AC091305.1-201ENST00000479476 895 ntBASIC18.37■□□□□ 0.53
ZNF48Q96MX3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF48Q96MX3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF48Q96MX3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF48Q96MX3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF48Q96MX3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF48Q96MX3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.36■□□□□ 0.53
ZNF48Q96MX3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF48Q96MX3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF48Q96MX3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms