Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00477Q96M19 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00477Q96M19 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00477Q96M19 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00477Q96M19 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00477Q96M19 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00477Q96M19 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.94■□□□□ 0.3
LINC00477Q96M19 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.94■□□□□ 0.3
LINC00477Q96M19 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.94■□□□□ 0.3
LINC00477Q96M19 NTF6A-201ENST00000591175 560 ntBASIC16.94■□□□□ 0.3
LINC00477Q96M19 BHLHE23-202ENST00000612929 1109 ntBASIC16.94■□□□□ 0.3
LINC00477Q96M19 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00477Q96M19 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00477Q96M19 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.94■□□□□ 0.3
LINC00477Q96M19 AC079834.2-201ENST00000609776 1949 ntBASIC16.94■□□□□ 0.3
LINC00477Q96M19 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00477Q96M19 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00477Q96M19 DUX4L18-201ENST00000553347 1267 ntBASIC16.93■□□□□ 0.3
LINC00477Q96M19 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00477Q96M19 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00477Q96M19 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00477Q96M19 C9orf163-202ENST00000624034 2573 ntBASIC16.93■□□□□ 0.3
LINC00477Q96M19 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00477Q96M19 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.93■□□□□ 0.3
LINC00477Q96M19 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00477Q96M19 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00477Q96M19 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00477Q96M19 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC00477Q96M19 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00477Q96M19 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00477Q96M19 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00477Q96M19 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00477Q96M19 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LINC00477Q96M19 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00477Q96M19 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00477Q96M19 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LINC00477Q96M19 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC00477Q96M19 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LINC00477Q96M19 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
LINC00477Q96M19 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC00477Q96M19 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00477Q96M19 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00477Q96M19 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00477Q96M19 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00477Q96M19 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.91■□□□□ 0.3
LINC00477Q96M19 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00477Q96M19 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00477Q96M19 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.91■□□□□ 0.3
LINC00477Q96M19 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.91■□□□□ 0.3
LINC00477Q96M19 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.91■□□□□ 0.3
LINC00477Q96M19 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00477Q96M19 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.91■□□□□ 0.3
LINC00477Q96M19 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC00477Q96M19 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.91■□□□□ 0.3
LINC00477Q96M19 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00477Q96M19 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LINC00477Q96M19 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00477Q96M19 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00477Q96M19 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00477Q96M19 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LINC00477Q96M19 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LINC00477Q96M19 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00477Q96M19 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC00477Q96M19 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00477Q96M19 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00477Q96M19 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00477Q96M19 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00477Q96M19 KRT18P24-201ENST00000344739 1156 ntBASIC16.9■□□□□ 0.3
LINC00477Q96M19 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00477Q96M19 AC120024.1-201ENST00000562672 995 ntBASIC16.9■□□□□ 0.3
LINC00477Q96M19 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.9■□□□□ 0.3
LINC00477Q96M19 PKD1P6-201ENST00000343738 4769 ntBASIC16.9■□□□□ 0.3
LINC00477Q96M19 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00477Q96M19 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LINC00477Q96M19 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.9■□□□□ 0.3
LINC00477Q96M19 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00477Q96M19 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00477Q96M19 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
LINC00477Q96M19 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LINC00477Q96M19 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.89■□□□□ 0.3
LINC00477Q96M19 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00477Q96M19 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LINC00477Q96M19 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00477Q96M19 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00477Q96M19 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00477Q96M19 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00477Q96M19 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.89■□□□□ 0.29
LINC00477Q96M19 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00477Q96M19 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00477Q96M19 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC00477Q96M19 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00477Q96M19 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC00477Q96M19 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LINC00477Q96M19 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LINC00477Q96M19 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00477Q96M19 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00477Q96M19 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.88■□□□□ 0.29
LINC00477Q96M19 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00477Q96M19 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00477Q96M19 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms