Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
APH1AQ96BI3 AC008406.3-201ENST00000620001 1374 ntBASIC20.09■□□□□ 0.81
APH1AQ96BI3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.09■□□□□ 0.81
APH1AQ96BI3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
APH1AQ96BI3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
APH1AQ96BI3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.09■□□□□ 0.81
APH1AQ96BI3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
APH1AQ96BI3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
APH1AQ96BI3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
APH1AQ96BI3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.08■□□□□ 0.81
APH1AQ96BI3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
APH1AQ96BI3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
APH1AQ96BI3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
APH1AQ96BI3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
APH1AQ96BI3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
APH1AQ96BI3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
APH1AQ96BI3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.08■□□□□ 0.8
APH1AQ96BI3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
APH1AQ96BI3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
APH1AQ96BI3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
APH1AQ96BI3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
APH1AQ96BI3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APH1AQ96BI3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.07■□□□□ 0.8
APH1AQ96BI3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
APH1AQ96BI3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APH1AQ96BI3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APH1AQ96BI3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.07■□□□□ 0.8
APH1AQ96BI3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
APH1AQ96BI3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.07■□□□□ 0.8
APH1AQ96BI3 AC131281.2-201ENST00000520478 145 ntBASIC20.07■□□□□ 0.8
APH1AQ96BI3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APH1AQ96BI3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APH1AQ96BI3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.07■□□□□ 0.8
APH1AQ96BI3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APH1AQ96BI3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
APH1AQ96BI3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APH1AQ96BI3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
APH1AQ96BI3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APH1AQ96BI3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.06■□□□□ 0.8
APH1AQ96BI3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APH1AQ96BI3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APH1AQ96BI3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
APH1AQ96BI3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APH1AQ96BI3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APH1AQ96BI3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APH1AQ96BI3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APH1AQ96BI3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APH1AQ96BI3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
APH1AQ96BI3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APH1AQ96BI3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APH1AQ96BI3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APH1AQ96BI3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APH1AQ96BI3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APH1AQ96BI3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
APH1AQ96BI3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
APH1AQ96BI3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APH1AQ96BI3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
APH1AQ96BI3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APH1AQ96BI3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APH1AQ96BI3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.04■□□□□ 0.8
APH1AQ96BI3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APH1AQ96BI3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APH1AQ96BI3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.03■□□□□ 0.8
APH1AQ96BI3 ABCB10P4-201ENST00000566803 2184 ntBASIC20.03■□□□□ 0.8
APH1AQ96BI3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
APH1AQ96BI3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APH1AQ96BI3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.03■□□□□ 0.8
APH1AQ96BI3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APH1AQ96BI3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
APH1AQ96BI3 AL512631.2-201ENST00000604634 923 ntBASIC20.03■□□□□ 0.8
APH1AQ96BI3 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.03■□□□□ 0.8
APH1AQ96BI3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APH1AQ96BI3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APH1AQ96BI3 AL136116.3-201ENST00000402907 1138 ntBASIC20.02■□□□□ 0.8
APH1AQ96BI3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.02■□□□□ 0.8
APH1AQ96BI3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.02■□□□□ 0.8
APH1AQ96BI3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APH1AQ96BI3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APH1AQ96BI3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
APH1AQ96BI3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
APH1AQ96BI3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.02■□□□□ 0.79
APH1AQ96BI3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APH1AQ96BI3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
APH1AQ96BI3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
APH1AQ96BI3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APH1AQ96BI3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APH1AQ96BI3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APH1AQ96BI3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APH1AQ96BI3 AC009102.2-201ENST00000606772 1639 ntBASIC20.01■□□□□ 0.79
APH1AQ96BI3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
APH1AQ96BI3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20■□□□□ 0.79
APH1AQ96BI3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
APH1AQ96BI3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20■□□□□ 0.79
APH1AQ96BI3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
APH1AQ96BI3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20■□□□□ 0.79
APH1AQ96BI3 SRD5A1P1-201ENST00000442297 786 ntBASIC20■□□□□ 0.79
APH1AQ96BI3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20■□□□□ 0.79
APH1AQ96BI3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20■□□□□ 0.79
APH1AQ96BI3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20■□□□□ 0.79
APH1AQ96BI3 MIR4466-201ENST00000606121 54 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms