Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
SMARCC1Q92922 AC123595.1-201ENST00000440769 1046 ntBASIC29.4■■■□□ 2.3
SMARCC1Q92922 AC092437.1-201ENST00000624794 1048 ntBASIC29.4■■■□□ 2.3
SMARCC1Q92922 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCC1Q92922 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SMARCC1Q92922 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC29.39■■■□□ 2.3
SMARCC1Q92922 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SMARCC1Q92922 AC027612.3-201ENST00000413684 1047 ntBASIC29.39■■■□□ 2.3
SMARCC1Q92922 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC29.39■■■□□ 2.3
SMARCC1Q92922 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
SMARCC1Q92922 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.29
SMARCC1Q92922 LSR-205ENST00000427250 1606 ntTSL 2 BASIC29.38■■■□□ 2.29
SMARCC1Q92922 AL161729.1-201ENST00000604104 1402 ntBASIC29.38■■■□□ 2.29
SMARCC1Q92922 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SMARCC1Q92922 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC29.38■■■□□ 2.29
SMARCC1Q92922 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
SMARCC1Q92922 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC29.38■■■□□ 2.29
SMARCC1Q92922 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SMARCC1Q92922 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
SMARCC1Q92922 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
SMARCC1Q92922 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC29.37■■■□□ 2.29
SMARCC1Q92922 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC29.37■■■□□ 2.29
SMARCC1Q92922 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC29.37■■■□□ 2.29
SMARCC1Q92922 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC29.36■■■□□ 2.29
SMARCC1Q92922 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
SMARCC1Q92922 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC29.36■■■□□ 2.29
SMARCC1Q92922 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC29.36■■■□□ 2.29
SMARCC1Q92922 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
SMARCC1Q92922 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.35■■■□□ 2.29
SMARCC1Q92922 CD37-213ENST00000598095 1598 ntTSL 2 BASIC29.35■■■□□ 2.29
SMARCC1Q92922 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SMARCC1Q92922 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
SMARCC1Q92922 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SMARCC1Q92922 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC29.35■■■□□ 2.29
SMARCC1Q92922 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC29.35■■■□□ 2.29
SMARCC1Q92922 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC29.35■■■□□ 2.29
SMARCC1Q92922 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SMARCC1Q92922 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
SMARCC1Q92922 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SMARCC1Q92922 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SMARCC1Q92922 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC29.35■■■□□ 2.29
SMARCC1Q92922 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SMARCC1Q92922 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SMARCC1Q92922 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC29.34■■■□□ 2.29
SMARCC1Q92922 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
SMARCC1Q92922 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SMARCC1Q92922 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC29.34■■■□□ 2.29
SMARCC1Q92922 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SMARCC1Q92922 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SMARCC1Q92922 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC29.33■■■□□ 2.29
SMARCC1Q92922 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC29.33■■■□□ 2.29
SMARCC1Q92922 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC29.33■■■□□ 2.29
SMARCC1Q92922 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
SMARCC1Q92922 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
SMARCC1Q92922 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
SMARCC1Q92922 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
SMARCC1Q92922 AC141586.4-201ENST00000624558 1573 ntBASIC29.33■■■□□ 2.29
SMARCC1Q92922 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC29.33■■■□□ 2.29
SMARCC1Q92922 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC29.33■■■□□ 2.29
SMARCC1Q92922 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.33■■■□□ 2.29
SMARCC1Q92922 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
SMARCC1Q92922 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SMARCC1Q92922 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC29.32■■■□□ 2.28
SMARCC1Q92922 MIR572-201ENST00000384983 95 ntBASIC29.32■■■□□ 2.28
SMARCC1Q92922 IGHV3-19-201ENST00000521488 291 ntBASIC29.32■■■□□ 2.28
SMARCC1Q92922 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SMARCC1Q92922 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC29.32■■■□□ 2.28
SMARCC1Q92922 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC29.32■■■□□ 2.28
SMARCC1Q92922 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
SMARCC1Q92922 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC29.32■■■□□ 2.28
SMARCC1Q92922 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SMARCC1Q92922 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.31■■■□□ 2.28
SMARCC1Q92922 USF2-207ENST00000595068 1612 ntTSL 5 BASIC29.31■■■□□ 2.28
SMARCC1Q92922 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC29.31■■■□□ 2.28
SMARCC1Q92922 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
SMARCC1Q92922 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SMARCC1Q92922 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC29.31■■■□□ 2.28
SMARCC1Q92922 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SMARCC1Q92922 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
SMARCC1Q92922 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SMARCC1Q92922 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC29.31■■■□□ 2.28
SMARCC1Q92922 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SMARCC1Q92922 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SMARCC1Q92922 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SMARCC1Q92922 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC29.3■■■□□ 2.28
SMARCC1Q92922 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SMARCC1Q92922 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SMARCC1Q92922 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SMARCC1Q92922 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC29.3■■■□□ 2.28
SMARCC1Q92922 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
SMARCC1Q92922 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC29.29■■■□□ 2.28
SMARCC1Q92922 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC29.29■■■□□ 2.28
SMARCC1Q92922 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC29.29■■■□□ 2.28
SMARCC1Q92922 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SMARCC1Q92922 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SMARCC1Q92922 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SMARCC1Q92922 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SMARCC1Q92922 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC29.28■■■□□ 2.28
SMARCC1Q92922 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC29.28■■■□□ 2.28
SMARCC1Q92922 AC012414.1-201ENST00000556676 535 ntBASIC29.28■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms