Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.92■■□□□ 1.74
USP6NLQ92738 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
USP6NLQ92738 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
USP6NLQ92738 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.91■■□□□ 1.74
USP6NLQ92738 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.91■■□□□ 1.74
USP6NLQ92738 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
USP6NLQ92738 DUX4L2-201ENST00000561772 1275 ntBASIC25.91■■□□□ 1.74
USP6NLQ92738 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.91■■□□□ 1.74
USP6NLQ92738 DUX4L6-201ENST00000626483 1275 ntBASIC25.91■■□□□ 1.74
USP6NLQ92738 DUX4L1-201ENST00000627662 1275 ntBASIC25.91■■□□□ 1.74
USP6NLQ92738 DUX4L8-201ENST00000629013 1275 ntBASIC25.91■■□□□ 1.74
USP6NLQ92738 DUX4L3-201ENST00000630187 1275 ntBASIC25.91■■□□□ 1.74
USP6NLQ92738 DUX4L7-201ENST00000630678 1275 ntBASIC25.91■■□□□ 1.74
USP6NLQ92738 DUX4L5-201ENST00000630834 1275 ntBASIC25.91■■□□□ 1.74
USP6NLQ92738 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
USP6NLQ92738 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
USP6NLQ92738 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
USP6NLQ92738 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
USP6NLQ92738 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
USP6NLQ92738 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
USP6NLQ92738 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.89■■□□□ 1.74
USP6NLQ92738 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
USP6NLQ92738 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.74
USP6NLQ92738 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.89■■□□□ 1.74
USP6NLQ92738 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
USP6NLQ92738 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.89■■□□□ 1.74
USP6NLQ92738 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
USP6NLQ92738 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.89■■□□□ 1.74
USP6NLQ92738 AL137784.2-201ENST00000607332 1000 ntBASIC25.89■■□□□ 1.74
USP6NLQ92738 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
USP6NLQ92738 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.89■■□□□ 1.73
USP6NLQ92738 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
USP6NLQ92738 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
USP6NLQ92738 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.88■■□□□ 1.73
USP6NLQ92738 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
USP6NLQ92738 pRNA.6-201ENST00000610482 90 ntBASIC25.88■■□□□ 1.73
USP6NLQ92738 pRNA.5-201ENST00000612139 90 ntBASIC25.88■■□□□ 1.73
USP6NLQ92738 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.88■■□□□ 1.73
USP6NLQ92738 pRNA.11-201ENST00000618423 90 ntBASIC25.88■■□□□ 1.73
USP6NLQ92738 pRNA.13-201ENST00000619112 90 ntBASIC25.88■■□□□ 1.73
USP6NLQ92738 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
USP6NLQ92738 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
USP6NLQ92738 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
USP6NLQ92738 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
USP6NLQ92738 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
USP6NLQ92738 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
USP6NLQ92738 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
USP6NLQ92738 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
USP6NLQ92738 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.87■■□□□ 1.73
USP6NLQ92738 AC126544.1-201ENST00000580842 1059 ntBASIC25.87■■□□□ 1.73
USP6NLQ92738 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.87■■□□□ 1.73
USP6NLQ92738 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
USP6NLQ92738 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.87■■□□□ 1.73
USP6NLQ92738 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
USP6NLQ92738 TSPY26P-201ENST00000476365 1326 ntBASIC25.87■■□□□ 1.73
USP6NLQ92738 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.86■■□□□ 1.73
USP6NLQ92738 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.86■■□□□ 1.73
USP6NLQ92738 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
USP6NLQ92738 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.86■■□□□ 1.73
USP6NLQ92738 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.86■■□□□ 1.73
USP6NLQ92738 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.86■■□□□ 1.73
USP6NLQ92738 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
USP6NLQ92738 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
USP6NLQ92738 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
USP6NLQ92738 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.86■■□□□ 1.73
USP6NLQ92738 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.86■■□□□ 1.73
USP6NLQ92738 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.85■■□□□ 1.73
USP6NLQ92738 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
USP6NLQ92738 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.85■■□□□ 1.73
USP6NLQ92738 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.85■■□□□ 1.73
USP6NLQ92738 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
USP6NLQ92738 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.85■■□□□ 1.73
USP6NLQ92738 AC027612.3-201ENST00000413684 1047 ntBASIC25.85■■□□□ 1.73
USP6NLQ92738 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
USP6NLQ92738 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.84■■□□□ 1.73
USP6NLQ92738 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.84■■□□□ 1.73
USP6NLQ92738 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
USP6NLQ92738 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.84■■□□□ 1.73
USP6NLQ92738 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.84■■□□□ 1.73
USP6NLQ92738 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
USP6NLQ92738 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
USP6NLQ92738 AC123595.1-201ENST00000440769 1046 ntBASIC25.84■■□□□ 1.73
USP6NLQ92738 SLC47A1P1-202ENST00000449666 945 ntBASIC25.84■■□□□ 1.73
USP6NLQ92738 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.84■■□□□ 1.73
USP6NLQ92738 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.84■■□□□ 1.73
USP6NLQ92738 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
USP6NLQ92738 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.84■■□□□ 1.73
USP6NLQ92738 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
USP6NLQ92738 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
USP6NLQ92738 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.83■■□□□ 1.73
USP6NLQ92738 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
USP6NLQ92738 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.83■■□□□ 1.73
USP6NLQ92738 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
USP6NLQ92738 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
USP6NLQ92738 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
USP6NLQ92738 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.83■■□□□ 1.73
USP6NLQ92738 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
USP6NLQ92738 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
USP6NLQ92738 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
USP6NLQ92738 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms