Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT9Q92600 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
CNOT9Q92600 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT9Q92600 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT9Q92600 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT9Q92600 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT9Q92600 ANOS2P-203ENST00000472227 1816 ntBASIC20.86■□□□□ 0.93
CNOT9Q92600 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT9Q92600 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CNOT9Q92600 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT9Q92600 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.86■□□□□ 0.93
CNOT9Q92600 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.86■□□□□ 0.93
CNOT9Q92600 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.86■□□□□ 0.93
CNOT9Q92600 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT9Q92600 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.86■□□□□ 0.93
CNOT9Q92600 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT9Q92600 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CNOT9Q92600 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT9Q92600 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.86■□□□□ 0.93
CNOT9Q92600 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT9Q92600 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CNOT9Q92600 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.85■□□□□ 0.93
CNOT9Q92600 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.85■□□□□ 0.93
CNOT9Q92600 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.85■□□□□ 0.93
CNOT9Q92600 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT9Q92600 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.85■□□□□ 0.93
CNOT9Q92600 SNX5-217ENST00000606557 1087 ntBASIC20.85■□□□□ 0.93
CNOT9Q92600 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.85■□□□□ 0.93
CNOT9Q92600 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT9Q92600 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT9Q92600 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CNOT9Q92600 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT9Q92600 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT9Q92600 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT9Q92600 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT9Q92600 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT9Q92600 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.84■□□□□ 0.93
CNOT9Q92600 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT9Q92600 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT9Q92600 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CNOT9Q92600 AC133561.1-201ENST00000568600 2415 ntBASIC20.83■□□□□ 0.93
CNOT9Q92600 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.83■□□□□ 0.93
CNOT9Q92600 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.83■□□□□ 0.93
CNOT9Q92600 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.83■□□□□ 0.93
CNOT9Q92600 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.83■□□□□ 0.93
CNOT9Q92600 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CNOT9Q92600 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT9Q92600 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.82■□□□□ 0.92
CNOT9Q92600 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT9Q92600 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT9Q92600 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CNOT9Q92600 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.82■□□□□ 0.92
CNOT9Q92600 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.82■□□□□ 0.92
CNOT9Q92600 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.82■□□□□ 0.92
CNOT9Q92600 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT9Q92600 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT9Q92600 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT9Q92600 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT9Q92600 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT9Q92600 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT9Q92600 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
CNOT9Q92600 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.81■□□□□ 0.92
CNOT9Q92600 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.81■□□□□ 0.92
CNOT9Q92600 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.81■□□□□ 0.92
CNOT9Q92600 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT9Q92600 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.81■□□□□ 0.92
CNOT9Q92600 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.81■□□□□ 0.92
CNOT9Q92600 AC021242.3-201ENST00000607598 1377 ntBASIC20.81■□□□□ 0.92
CNOT9Q92600 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.81■□□□□ 0.92
CNOT9Q92600 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CNOT9Q92600 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.8■□□□□ 0.92
CNOT9Q92600 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
CNOT9Q92600 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT9Q92600 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.8■□□□□ 0.92
CNOT9Q92600 BX664725.1-201ENST00000438252 379 ntBASIC20.8■□□□□ 0.92
CNOT9Q92600 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.8■□□□□ 0.92
CNOT9Q92600 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CNOT9Q92600 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.8■□□□□ 0.92
CNOT9Q92600 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CNOT9Q92600 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.8■□□□□ 0.92
CNOT9Q92600 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT9Q92600 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT9Q92600 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.8■□□□□ 0.92
CNOT9Q92600 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT9Q92600 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT9Q92600 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT9Q92600 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CNOT9Q92600 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.79■□□□□ 0.92
CNOT9Q92600 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CNOT9Q92600 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.79■□□□□ 0.92
CNOT9Q92600 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT9Q92600 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT9Q92600 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.79■□□□□ 0.92
CNOT9Q92600 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT9Q92600 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
CNOT9Q92600 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT9Q92600 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CNOT9Q92600 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.79■□□□□ 0.92
CNOT9Q92600 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT9Q92600 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms