Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.01■■■□□ 2.08
SNED1Q8TER0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.01■■■□□ 2.07
SNED1Q8TER0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SNED1Q8TER0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
SNED1Q8TER0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
SNED1Q8TER0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
SNED1Q8TER0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
SNED1Q8TER0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SNED1Q8TER0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SNED1Q8TER0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC28.01■■■□□ 2.07
SNED1Q8TER0 AL022069.1-201ENST00000568025 1636 ntBASIC28■■■□□ 2.07
SNED1Q8TER0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28■■■□□ 2.07
SNED1Q8TER0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SNED1Q8TER0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC28■■■□□ 2.07
SNED1Q8TER0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC28■■■□□ 2.07
SNED1Q8TER0 SLC47A1P1-202ENST00000449666 945 ntBASIC28■■■□□ 2.07
SNED1Q8TER0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC28■■■□□ 2.07
SNED1Q8TER0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC28■■■□□ 2.07
SNED1Q8TER0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
SNED1Q8TER0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC27.99■■■□□ 2.07
SNED1Q8TER0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
SNED1Q8TER0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SNED1Q8TER0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC27.99■■■□□ 2.07
SNED1Q8TER0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.99■■■□□ 2.07
SNED1Q8TER0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SNED1Q8TER0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
SNED1Q8TER0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SNED1Q8TER0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC27.98■■■□□ 2.07
SNED1Q8TER0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC27.98■■■□□ 2.07
SNED1Q8TER0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SNED1Q8TER0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC27.97■■■□□ 2.07
SNED1Q8TER0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
SNED1Q8TER0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC27.97■■■□□ 2.07
SNED1Q8TER0 TSPY26P-201ENST00000476365 1326 ntBASIC27.96■■■□□ 2.07
SNED1Q8TER0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC27.96■■■□□ 2.07
SNED1Q8TER0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
SNED1Q8TER0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
SNED1Q8TER0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SNED1Q8TER0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC27.96■■■□□ 2.07
SNED1Q8TER0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SNED1Q8TER0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC27.96■■■□□ 2.07
SNED1Q8TER0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC27.96■■■□□ 2.07
SNED1Q8TER0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC27.96■■■□□ 2.07
SNED1Q8TER0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
SNED1Q8TER0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SNED1Q8TER0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
SNED1Q8TER0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.06
SNED1Q8TER0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
SNED1Q8TER0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC27.95■■■□□ 2.06
SNED1Q8TER0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
SNED1Q8TER0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SNED1Q8TER0 AC123595.1-201ENST00000440769 1046 ntBASIC27.94■■■□□ 2.06
SNED1Q8TER0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.94■■■□□ 2.06
SNED1Q8TER0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SNED1Q8TER0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
SNED1Q8TER0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SNED1Q8TER0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SNED1Q8TER0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
SNED1Q8TER0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SNED1Q8TER0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
SNED1Q8TER0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SNED1Q8TER0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SNED1Q8TER0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
SNED1Q8TER0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC27.93■■■□□ 2.06
SNED1Q8TER0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
SNED1Q8TER0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
SNED1Q8TER0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SNED1Q8TER0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC27.92■■■□□ 2.06
SNED1Q8TER0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC27.92■■■□□ 2.06
SNED1Q8TER0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC27.92■■■□□ 2.06
SNED1Q8TER0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC27.92■■■□□ 2.06
SNED1Q8TER0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC27.92■■■□□ 2.06
SNED1Q8TER0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC27.92■■■□□ 2.06
SNED1Q8TER0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SNED1Q8TER0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.92■■■□□ 2.06
SNED1Q8TER0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SNED1Q8TER0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC27.92■■■□□ 2.06
SNED1Q8TER0 IGHV3-19-201ENST00000521488 291 ntBASIC27.92■■■□□ 2.06
SNED1Q8TER0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC27.92■■■□□ 2.06
SNED1Q8TER0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC27.92■■■□□ 2.06
SNED1Q8TER0 pRNA.6-201ENST00000610482 90 ntBASIC27.92■■■□□ 2.06
SNED1Q8TER0 pRNA.5-201ENST00000612139 90 ntBASIC27.92■■■□□ 2.06
SNED1Q8TER0 pRNA.11-201ENST00000618423 90 ntBASIC27.92■■■□□ 2.06
SNED1Q8TER0 pRNA.13-201ENST00000619112 90 ntBASIC27.92■■■□□ 2.06
SNED1Q8TER0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
SNED1Q8TER0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.91■■■□□ 2.06
SNED1Q8TER0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.91■■■□□ 2.06
SNED1Q8TER0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
SNED1Q8TER0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC27.91■■■□□ 2.06
SNED1Q8TER0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
SNED1Q8TER0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
SNED1Q8TER0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
SNED1Q8TER0 AC012414.1-201ENST00000556676 535 ntBASIC27.91■■■□□ 2.06
SNED1Q8TER0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC27.91■■■□□ 2.06
SNED1Q8TER0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
SNED1Q8TER0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
SNED1Q8TER0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
SNED1Q8TER0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC27.9■■■□□ 2.06
SNED1Q8TER0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC27.9■■■□□ 2.06
SNED1Q8TER0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC27.9■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms