Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDH19Q8TAB3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
PCDH19Q8TAB3 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.48■■□□□ 1.35
PCDH19Q8TAB3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH19Q8TAB3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PCDH19Q8TAB3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH19Q8TAB3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH19Q8TAB3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
PCDH19Q8TAB3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
PCDH19Q8TAB3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH19Q8TAB3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH19Q8TAB3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
PCDH19Q8TAB3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.47■■□□□ 1.35
PCDH19Q8TAB3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH19Q8TAB3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH19Q8TAB3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH19Q8TAB3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
PCDH19Q8TAB3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH19Q8TAB3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH19Q8TAB3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDH19Q8TAB3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
PCDH19Q8TAB3 BX664725.1-201ENST00000438252 379 ntBASIC23.46■■□□□ 1.35
PCDH19Q8TAB3 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.46■■□□□ 1.35
PCDH19Q8TAB3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
PCDH19Q8TAB3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.46■■□□□ 1.35
PCDH19Q8TAB3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
PCDH19Q8TAB3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.46■■□□□ 1.35
PCDH19Q8TAB3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.45■■□□□ 1.35
PCDH19Q8TAB3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.45■■□□□ 1.35
PCDH19Q8TAB3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH19Q8TAB3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDH19Q8TAB3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH19Q8TAB3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH19Q8TAB3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDH19Q8TAB3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDH19Q8TAB3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDH19Q8TAB3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.43■■□□□ 1.34
PCDH19Q8TAB3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDH19Q8TAB3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDH19Q8TAB3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDH19Q8TAB3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.43■■□□□ 1.34
PCDH19Q8TAB3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDH19Q8TAB3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH19Q8TAB3 AC092068.2-201ENST00000590491 1708 ntBASIC23.42■■□□□ 1.34
PCDH19Q8TAB3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH19Q8TAB3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.42■■□□□ 1.34
PCDH19Q8TAB3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH19Q8TAB3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH19Q8TAB3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH19Q8TAB3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH19Q8TAB3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDH19Q8TAB3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.41■■□□□ 1.34
PCDH19Q8TAB3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.41■■□□□ 1.34
PCDH19Q8TAB3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH19Q8TAB3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.41■■□□□ 1.34
PCDH19Q8TAB3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDH19Q8TAB3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH19Q8TAB3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.41■■□□□ 1.34
PCDH19Q8TAB3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDH19Q8TAB3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH19Q8TAB3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH19Q8TAB3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH19Q8TAB3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDH19Q8TAB3 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDH19Q8TAB3 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDH19Q8TAB3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH19Q8TAB3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH19Q8TAB3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
PCDH19Q8TAB3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH19Q8TAB3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
PCDH19Q8TAB3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
PCDH19Q8TAB3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.4■■□□□ 1.34
PCDH19Q8TAB3 AC239859.2-201ENST00000444165 318 ntBASIC23.4■■□□□ 1.34
PCDH19Q8TAB3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.4■■□□□ 1.34
PCDH19Q8TAB3 Z92544.1-202ENST00000571933 1220 ntBASIC23.4■■□□□ 1.34
PCDH19Q8TAB3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDH19Q8TAB3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.39■■□□□ 1.34
PCDH19Q8TAB3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.39■■□□□ 1.34
PCDH19Q8TAB3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDH19Q8TAB3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.39■■□□□ 1.34
PCDH19Q8TAB3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDH19Q8TAB3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDH19Q8TAB3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.39■■□□□ 1.33
PCDH19Q8TAB3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH19Q8TAB3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms