Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 HLA-V-202ENST00000446817 847 ntBASIC16.95■□□□□ 0.3
NUP35Q8NFH5 AC126177.7-201ENST00000547904 679 ntBASIC16.95■□□□□ 0.3
NUP35Q8NFH5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NUP35Q8NFH5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
NUP35Q8NFH5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NUP35Q8NFH5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NUP35Q8NFH5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NUP35Q8NFH5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP35Q8NFH5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP35Q8NFH5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
NUP35Q8NFH5 DUX4L13-201ENST00000554103 1267 ntBASIC16.94■□□□□ 0.3
NUP35Q8NFH5 DUX4L15-201ENST00000611059 1267 ntBASIC16.94■□□□□ 0.3
NUP35Q8NFH5 DUX4L23-201ENST00000615195 1269 ntBASIC16.94■□□□□ 0.3
NUP35Q8NFH5 DUX4L24-201ENST00000617576 1269 ntBASIC16.94■□□□□ 0.3
NUP35Q8NFH5 DUX4L22-201ENST00000618238 1269 ntBASIC16.94■□□□□ 0.3
NUP35Q8NFH5 DUX4L20-201ENST00000619712 1269 ntBASIC16.94■□□□□ 0.3
NUP35Q8NFH5 DUX4L21-201ENST00000622058 1269 ntBASIC16.94■□□□□ 0.3
NUP35Q8NFH5 DUX4L10-201ENST00000622460 1267 ntBASIC16.94■□□□□ 0.3
NUP35Q8NFH5 DUX4L25-201ENST00000624915 1269 ntBASIC16.94■□□□□ 0.3
NUP35Q8NFH5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP35Q8NFH5 ESRRAP2-201ENST00000418437 1549 ntBASIC16.94■□□□□ 0.3
NUP35Q8NFH5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP35Q8NFH5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP35Q8NFH5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.94■□□□□ 0.3
NUP35Q8NFH5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NUP35Q8NFH5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.93■□□□□ 0.3
NUP35Q8NFH5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.93■□□□□ 0.3
NUP35Q8NFH5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.93■□□□□ 0.3
NUP35Q8NFH5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUP35Q8NFH5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.93■□□□□ 0.3
NUP35Q8NFH5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NUP35Q8NFH5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.93■□□□□ 0.3
NUP35Q8NFH5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.93■□□□□ 0.3
NUP35Q8NFH5 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.93■□□□□ 0.3
NUP35Q8NFH5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NUP35Q8NFH5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NUP35Q8NFH5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.92■□□□□ 0.3
NUP35Q8NFH5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.92■□□□□ 0.3
NUP35Q8NFH5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP35Q8NFH5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.92■□□□□ 0.3
NUP35Q8NFH5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP35Q8NFH5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP35Q8NFH5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NUP35Q8NFH5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.92■□□□□ 0.3
NUP35Q8NFH5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP35Q8NFH5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.92■□□□□ 0.3
NUP35Q8NFH5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP35Q8NFH5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.91■□□□□ 0.3
NUP35Q8NFH5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUP35Q8NFH5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP35Q8NFH5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP35Q8NFH5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP35Q8NFH5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP35Q8NFH5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUP35Q8NFH5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NUP35Q8NFH5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP35Q8NFH5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.9■□□□□ 0.3
NUP35Q8NFH5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.9■□□□□ 0.3
NUP35Q8NFH5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.9■□□□□ 0.3
NUP35Q8NFH5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
NUP35Q8NFH5 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NUP35Q8NFH5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.9■□□□□ 0.3
NUP35Q8NFH5 LINC01971-201ENST00000617888 1048 ntBASIC16.9■□□□□ 0.3
NUP35Q8NFH5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP35Q8NFH5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NUP35Q8NFH5 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.9■□□□□ 0.3
NUP35Q8NFH5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NUP35Q8NFH5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NUP35Q8NFH5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.89■□□□□ 0.29
NUP35Q8NFH5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP35Q8NFH5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP35Q8NFH5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.89■□□□□ 0.29
NUP35Q8NFH5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.89■□□□□ 0.29
NUP35Q8NFH5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUP35Q8NFH5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP35Q8NFH5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.89■□□□□ 0.29
NUP35Q8NFH5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP35Q8NFH5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.89■□□□□ 0.29
NUP35Q8NFH5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP35Q8NFH5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP35Q8NFH5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NUP35Q8NFH5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms