Protein–RNA interactions for Protein: Q8NEN9

PDZD8, PDZ domain-containing protein 8, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8Q8NEN9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDZD8Q8NEN9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.78■■□□□ 1.4
PDZD8Q8NEN9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDZD8Q8NEN9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.78■■□□□ 1.4
PDZD8Q8NEN9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.78■■□□□ 1.4
PDZD8Q8NEN9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PDZD8Q8NEN9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDZD8Q8NEN9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.78■■□□□ 1.4
PDZD8Q8NEN9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDZD8Q8NEN9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PDZD8Q8NEN9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.77■■□□□ 1.4
PDZD8Q8NEN9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PDZD8Q8NEN9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.77■■□□□ 1.4
PDZD8Q8NEN9 AC133561.4-201ENST00000566112 224 ntBASIC23.77■■□□□ 1.4
PDZD8Q8NEN9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PDZD8Q8NEN9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDZD8Q8NEN9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDZD8Q8NEN9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDZD8Q8NEN9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDZD8Q8NEN9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDZD8Q8NEN9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PDZD8Q8NEN9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.75■■□□□ 1.39
PDZD8Q8NEN9 UNC93B3-201ENST00000308076 687 ntBASIC23.75■■□□□ 1.39
PDZD8Q8NEN9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PDZD8Q8NEN9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDZD8Q8NEN9 C17orf82-201ENST00000623772 1530 ntBASIC23.74■■□□□ 1.39
PDZD8Q8NEN9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDZD8Q8NEN9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDZD8Q8NEN9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.74■■□□□ 1.39
PDZD8Q8NEN9 AC106739.1-201ENST00000617035 715 ntBASIC23.74■■□□□ 1.39
PDZD8Q8NEN9 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.74■■□□□ 1.39
PDZD8Q8NEN9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDZD8Q8NEN9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
PDZD8Q8NEN9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.74■■□□□ 1.39
PDZD8Q8NEN9 AC141586.4-201ENST00000624558 1573 ntBASIC23.74■■□□□ 1.39
PDZD8Q8NEN9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
PDZD8Q8NEN9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDZD8Q8NEN9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
PDZD8Q8NEN9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
PDZD8Q8NEN9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PDZD8Q8NEN9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.73■■□□□ 1.39
PDZD8Q8NEN9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
PDZD8Q8NEN9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDZD8Q8NEN9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.73■■□□□ 1.39
PDZD8Q8NEN9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.73■■□□□ 1.39
PDZD8Q8NEN9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDZD8Q8NEN9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDZD8Q8NEN9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.73■■□□□ 1.39
PDZD8Q8NEN9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 PBX2P1-201ENST00000493219 1291 ntBASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 AL136162.1-201ENST00000607711 1078 ntBASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 AC241377.3-202ENST00000626088 1088 ntBASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 AC241585.3-202ENST00000628937 1088 ntBASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 AC245100.8-202ENST00000629247 1058 ntBASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDZD8Q8NEN9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.71■■□□□ 1.39
PDZD8Q8NEN9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.71■■□□□ 1.39
PDZD8Q8NEN9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDZD8Q8NEN9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PDZD8Q8NEN9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.71■■□□□ 1.39
PDZD8Q8NEN9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
PDZD8Q8NEN9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PDZD8Q8NEN9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PDZD8Q8NEN9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PDZD8Q8NEN9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
PDZD8Q8NEN9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.7■■□□□ 1.38
PDZD8Q8NEN9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDZD8Q8NEN9 AC135279.3-201ENST00000610945 1311 ntBASIC23.7■■□□□ 1.38
PDZD8Q8NEN9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PDZD8Q8NEN9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.7■■□□□ 1.38
PDZD8Q8NEN9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDZD8Q8NEN9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
PDZD8Q8NEN9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.7■■□□□ 1.38
PDZD8Q8NEN9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDZD8Q8NEN9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
PDZD8Q8NEN9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.7■■□□□ 1.38
PDZD8Q8NEN9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDZD8Q8NEN9 SYT6-210ENST00000641643 1587 ntBASIC23.69■■□□□ 1.38
PDZD8Q8NEN9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDZD8Q8NEN9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.69■■□□□ 1.38
PDZD8Q8NEN9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDZD8Q8NEN9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.69■■□□□ 1.38
PDZD8Q8NEN9 AC099791.2-201ENST00000605725 427 ntBASIC23.69■■□□□ 1.38
PDZD8Q8NEN9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PDZD8Q8NEN9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDZD8Q8NEN9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.68■■□□□ 1.38
PDZD8Q8NEN9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PDZD8Q8NEN9 AC005837.3-201ENST00000612163 286 ntBASIC23.68■■□□□ 1.38
PDZD8Q8NEN9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms